| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3116 |
|---|
| Symbol | |
|---|
| ID | 8884315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 3290805 |
|---|
| End bp | 3291500 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003511880 |
|---|
| Protein GI | 291300602 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00504162 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0120002 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCCG ACGCGCAGGG ACGCGTACGG AAGGAAATCG CCGAGGCACC GTGGGTCTTC
GTGCTGATGT GGCTGGGCTT CCCACTCATC GGCGGGGCAC TGCTGTGGGG CCTGAGCCGA
TTCGTGGACT GGCTGTCAGG CCAGGACTGG GTACCGTTCG AGGGCCTGTT CGACCTCGCG
GCCTCGGCCC CGGAGCCCTA CCTGACGATC GGGGCGATCG TCGTTGGCGT ACTGCTCGGC
CTCGGCCTGG CGTTCCTCGG CCACGCCGAC AGCCTCAAGG TCACCATCAC CGACGACGAC
ATCACCGCCA CCCGGGGCGG CAAGTCCAAG AAGGTCGCCA CCACCGACGT CACCGGAGCC
TTCCGCGACG GCAAATACCT GGTTCTGCTC GGCGCGAACG GCACCGAACT CCTGCGCGAG
AAGACCGACA TCCCCCGCGA ACGCATGCGC CAGGACTTCA TCGACTGCGG ATTCACCTGG
CACGAGGCCG ACCCACACGC CGACGAATGG CGACGCTGGG TCGACGGCAC CCCGGACCTC
CCCAAGGGCG GCAACGCCCT ACTGCGCACG CGCACCAAGG AACTGAAGAA AATGGACCCC
GACCTCGCCG ACATCGACAA GGAACTACGC GACCTCGGCG TCATGGTGCG CTACGACAAG
GGCAAGCACT ACTGGCGCCT GTCCAACCGC GACTGA
|
|---|
| Protein sequence | MDADAQGRVR KEIAEAPWVF VLMWLGFPLI GGALLWGLSR FVDWLSGQDW VPFEGLFDLA
ASAPEPYLTI GAIVVGVLLG LGLAFLGHAD SLKVTITDDD ITATRGGKSK KVATTDVTGA
FRDGKYLVLL GANGTELLRE KTDIPRERMR QDFIDCGFTW HEADPHADEW RRWVDGTPDL
PKGGNALLRT RTKELKKMDP DLADIDKELR DLGVMVRYDK GKHYWRLSNR D
|
|---|
| |