| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3093 |
|---|
| Symbol | |
|---|
| ID | 8884292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 3264585 |
|---|
| End bp | 3265721 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | Citrate (Si)-synthase |
|---|
| Protein accession | YP_003511857 |
|---|
| Protein GI | 291300579 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.832749 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACTT TGGTGGATGT ACCCAAGGGC CTTGCCGGGG TTGTGGTAAC CGATACCCAG
ATCGGTGACG TGCGTGGAGA AGAGGGTTTC TACCACTATC GGCAGTACTC GGCCATTGAC
CTGGCCCAGA ACTGTTCCTT TGAGGAAGTC TGGTACCTGA TGTTCAACGG CGCGCTGCCG
ACGCGCGCCC AGCTTGACGA GTTCCGGGCC AAGGTGGCGC CGCTGCGGCA CCTGTCTCCC
GGATTGACGG CGTTGCTGCC CTCGCTGGCC GGTGCCAAAC CGCTGGAGGG CCTGCGCACC
GCGCTGTCCT TCGCCGCCGC CGAGCGCGGC ATGCGGCCGT TGCTGGACAC CGACGAGACC
GAACGCACCG AGGACGTGCT GTTCGCCTGC GCCCAGGTGC CCACGATCCT GACCGCGCTG
TACCGGCTCA ACACCGGCAA GGACCCGATC GCGCCCCGCG ACGACCTGCC GTACGCGTCG
AACTACCTGT ACATGCTCAC CGGTGCCGAG CCGAGCGTCG AATACGGGCA CGCCATCGAG
CGGTACCTGA TCTCGACCGT CGACCACGGT TTCAACAACT CCACCTTCAC CGCCCGCACC
ATCGCCTCCA CCGGCGCCGA CGCCGGTGCC TGCCTGGTCG GCGCCATCGG TTCGCTGTCG
GGCCCGCTGC ACGGCGGCGC CCCCTCCCGG GCGCTGGCGG CGCTGGAGGA GATCGGCAGC
CCCGACAAGA TCGACAACTG GGTGCGCCAC AAGGTCGAAT CCGGTGACCG CATCATGGGC
TTCGGGCACG CGGTCTACAA GACCGACGAC CCGCGCTCGC TGATGCTGCG CGACGTGGCC
ACCTCGCTGG GCGGCGACCT GGCCGACTTC GCCAAGCAGG TCGAGCGCCG CGTGGTGGAG
ATCCTGGCCG AGCTCAAGCC CGGCCGCAAC CTCTACACCA ACGTGGAGTT CTACGCCGGG
GTCGTCATGG AGCAGTGCGG CGTGCCGCGC GACATGTTCA CCCCGACCTT CACCGCCTCG
CGGATGGTCG GCTGGAGCGC CAACATCCTC GAACAGGCCA ACGACTCCAA GATCATCCGC
CCGCGGGCCC GCTACACCGG AGTGGAAGCG CCGCAGCCGG TCGTCAAGCC GGAATAA
|
|---|
| Protein sequence | MTTLVDVPKG LAGVVVTDTQ IGDVRGEEGF YHYRQYSAID LAQNCSFEEV WYLMFNGALP
TRAQLDEFRA KVAPLRHLSP GLTALLPSLA GAKPLEGLRT ALSFAAAERG MRPLLDTDET
ERTEDVLFAC AQVPTILTAL YRLNTGKDPI APRDDLPYAS NYLYMLTGAE PSVEYGHAIE
RYLISTVDHG FNNSTFTART IASTGADAGA CLVGAIGSLS GPLHGGAPSR ALAALEEIGS
PDKIDNWVRH KVESGDRIMG FGHAVYKTDD PRSLMLRDVA TSLGGDLADF AKQVERRVVE
ILAELKPGRN LYTNVEFYAG VVMEQCGVPR DMFTPTFTAS RMVGWSANIL EQANDSKIIR
PRARYTGVEA PQPVVKPE
|
|---|
| |