Gene Snas_3085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3085 
Symbol 
ID8884284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3256481 
End bp3257440 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003511849 
Protein GI291300571 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.229103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.567857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGACTT GCCGAGTGTC CGCACCTGCC TCCGCCCCCG TCAAGTCCGC CATCGACATC 
AAGGTGATCC TCGCCGTCTC GGTCACCCTC CTGGCCTGGG CTTCGGCCTT CGTCTCCATC
CGCGTCGCGG TCGAAGAGTA TTCACCGGGA TCGATGGCCC TGGGCCGGAT GCTGGTGGCC
GCGATCTTCC TGCTGGCCTT CCTGCTCATC AAGGGCGAGG GCCTGCCGCC CAAATCGGCC
TGGCCCGGGA TCATCTTCTC GGGCATCTTC TGGTTCGGCC TGTACATGAT CGTCCTCAAC
TGGGGCGAAC AGCTCGTGGA CGCCGGAACC GCCGCCATGA TCGTCAACAT CGGTCCGATC
CTGATGGCGC TGTTGGGCGG CTGGTTGCTC AAGGAGGGCA TGCCGCCGCG ACTGTTCGCG
GGCCTGGGCG TGTCGTTCCT CGGCGCCGTC CTCGTGGGAC TGTCGATGTC GAACGGTGAC
GAGGAGGGCT CGACGCTGGG CGTGCTGCTG TGCCTGTTGG CGGCGGTGTG TTACGCCGGT
GGCGTCGTCA GCCAGAAGCC GGTCCTCAAG ACCACCTCCC CGTTGCAGGC CACCACCTTC
GGCGCCATGA TCGGCGCGGT GGCGTGCCTG CCGTTCGCCG GACAGCTGGT GTCCGACGTG
GCCACGGCGT CGCTGTCGGC GACCCTCAAC GTCGTCTACC TCGGCGTCTT CCCCACGGCG
ATCGCGTTCA CCACGTGGTT CTACGCGCTG GCGCGCACCA CGGCGGGCAA GATGGGCGCG
ACCACCTACA TCGTCCCGGC CATCGTCGTG ATCATGTCCT GGCTGGTGCT GGGCGAGATC
CCCGGTCTGC TGGCCATGCT CGGCGGCGCA CTGTGCCTGG TCGGGGTCGC GGTCTCGCGC
AGCCGCCCGC GCCGCAAGGC GAAGGTGGTT CCGGAGGTCG CACCCGCGAC CGCCGACTAG
 
Protein sequence
MLTCRVSAPA SAPVKSAIDI KVILAVSVTL LAWASAFVSI RVAVEEYSPG SMALGRMLVA 
AIFLLAFLLI KGEGLPPKSA WPGIIFSGIF WFGLYMIVLN WGEQLVDAGT AAMIVNIGPI
LMALLGGWLL KEGMPPRLFA GLGVSFLGAV LVGLSMSNGD EEGSTLGVLL CLLAAVCYAG
GVVSQKPVLK TTSPLQATTF GAMIGAVACL PFAGQLVSDV ATASLSATLN VVYLGVFPTA
IAFTTWFYAL ARTTAGKMGA TTYIVPAIVV IMSWLVLGEI PGLLAMLGGA LCLVGVAVSR
SRPRRKAKVV PEVAPATAD