Gene Snas_3049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3049 
Symbol 
ID8884248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3215704 
End bp3217635 
Gene Length1932 bp 
Protein Length643 aa 
Translation table11 
GC content67% 
IMG OID 
Productasparagine synthase (glutamine-hydrolyzing) 
Protein accessionYP_003511813 
Protein GI291300535 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.524302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGGAA TCCTGACCTT CATCAGCTCC CGAGGGGCTG CCGCCGAGCG ATCCGATGCC 
ATCGCCGCCG CCAACGAACG CCTCCACCAC CGCGGCCCCG ATGAGACCGG CATGGAGCTG
ATCGACACCG ATGTCGCGAT CGCGCACAAA CGGCTGTCGA TCATCGACGT TGAGTCCTCC
CACCAGCCGA TGTGGTACTC CGGCAACCGG TACGTCATGA CGTACAACGG CGAGATCTAC
AACTACAAGG AACTGCGCGC CGAGCTCATC GAGAAGCACG GCGCCGAGTT CGCCACCCAG
GGCGACGGTG AGGTCATCCT CGCCGGATAC CACCACTGGG GCCCCAACGT CGCCGCCCGG
CTGCGCGGCA TGTTCGCGTT CGTCATCTGG GACCGGCAGC AGCGCCGCGC CTACGGCGCC
CGCGACCCCT GGGGCATCAA GCCGATGTTC CACCTGCACA CCGACGACGG CGTCTACTTC
TCCAGCGAGA AGAAGGCCCT GATGCCGTTC ACCGACCCGA ACGACCTCGA CCGGGAGAAC
CTGGCGCACT ACCTGACGCT GCAGTACCCG CCCGAGCCGG GCAGCATGCA CCGCGGCGTC
AACCGGATCG CCGCCGGACA CTACGTCGAG TTCGCCCCCG GCAAACCGGT CGAGGCGACC
CGCTACTTCA ACCCCGACTT CCGGCCCCGC TCGGTCGACA ACCCGCAGAA GCTGTACGAC
GAGATCGCCG AGACACTGCG CGAGTCGGTG CGGATGCACA TGCGCGCCGA CGTGCCGGTG
GGCGCGTTCC TGTCCAGCGG CATCGACTCC ACCGGCGTCG TCGCGATGGC CCGCGAGTTC
AACCCCGACA TCCTCGCCTT CACCATCGGC TACGAGGGCC TGGGCCAGTA CAACGAACTG
GACGTGGCCT CAGAATCCGC GCAGCACCTG GGCGTCAAAC TGATCGGCAC CACGATCGGC
GCGCAGGAGA TGATGGACGC GCTGCCCAAG ATCGTGTGGC ACCTGGACGA CCCGATCGCC
GACCCGTCAC TGGTGCCGCT GTACTACGTC GCCAAGAAGG CCGCCGAACA CGTCACCGTG
GTCCTGGGCG GCGAGGGCGC CGACGAGTTC TTCGGCGGCT ACGGCATCTA CCGGGAACCG
CTGTCGCTGC AAGCCATCCA AGGCCTGCCC AAGGGCGTGC GCTCCAGCCT GCGCGCGGTG
TCCAAGGTGA TCCCCGAGGG CGTCAAGGGC AAGAGCTTCC TGGAACGCGG CACCACCGAC
CTCGAACGCC GCTTCGTCGG CAACGCCAAC ATCTTCGGCG AGGAGGAGAA GCGGCGGCTG
TTGCGCGGCT ACGACTCCAG CGTCGACTTC AGCGCCATCA CCGGCCCGCT GTGGGCCGAG
TGCGAGGGCC TGGACGAACC CACCCGGATG CAGTACGTCG ACATCAAGAC CTGGCTGCGC
GGCGACATCC TCGTCAAGGC CGACCGCATC TCGATGGCCC ACAGCCTCGA AGTCCGGGTG
CCGTTCCTGG ACCCGGAGGT GTTCAAGGTG GCCTCGACCA TCCCGGTGGA CGAGAAGGTC
CGCCTGCGCG GCAACCACAC CAAGTTCGCG CTGCGCCAGG CGTTGGCCAA GGTGGTGCCA
CCGGCGATCG TCAACCGCCC CAAGATGGGT TTCCCGACTC CGACGCGGGT GTGGCTGGCC
AACGAGATGT TCGAGTGGGC CGACAACATC CTGGCCACCG CGGGCTGCGG CCACCTCATC
GACCTCGAGT ACGTGCGCGG CCTGCTGCGC GACCACAAGG AGGGCAAGGC CGACAACAGC
CGCAAGGTGT GGACGATCCT GGTGTTCTGC CTGTGGCACG CGATCTTCGT CGAACAGTCG
CTGGACCCGG GCATTGAACG CGCCACCTCG CAGCTGGCCG CCAAACCGGC CGTCGGCTCG
ATGGTGTCCT AG
 
Protein sequence
MCGILTFISS RGAAAERSDA IAAANERLHH RGPDETGMEL IDTDVAIAHK RLSIIDVESS 
HQPMWYSGNR YVMTYNGEIY NYKELRAELI EKHGAEFATQ GDGEVILAGY HHWGPNVAAR
LRGMFAFVIW DRQQRRAYGA RDPWGIKPMF HLHTDDGVYF SSEKKALMPF TDPNDLDREN
LAHYLTLQYP PEPGSMHRGV NRIAAGHYVE FAPGKPVEAT RYFNPDFRPR SVDNPQKLYD
EIAETLRESV RMHMRADVPV GAFLSSGIDS TGVVAMAREF NPDILAFTIG YEGLGQYNEL
DVASESAQHL GVKLIGTTIG AQEMMDALPK IVWHLDDPIA DPSLVPLYYV AKKAAEHVTV
VLGGEGADEF FGGYGIYREP LSLQAIQGLP KGVRSSLRAV SKVIPEGVKG KSFLERGTTD
LERRFVGNAN IFGEEEKRRL LRGYDSSVDF SAITGPLWAE CEGLDEPTRM QYVDIKTWLR
GDILVKADRI SMAHSLEVRV PFLDPEVFKV ASTIPVDEKV RLRGNHTKFA LRQALAKVVP
PAIVNRPKMG FPTPTRVWLA NEMFEWADNI LATAGCGHLI DLEYVRGLLR DHKEGKADNS
RKVWTILVFC LWHAIFVEQS LDPGIERATS QLAAKPAVGS MVS