Gene Snas_3002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3002 
Symbol 
ID8884201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3169693 
End bp3170388 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content71% 
IMG OID 
Productdeoxyribose-phosphate aldolase 
Protein accessionYP_003511767 
Protein GI291300489 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00170896 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCGCACCG TCGCCGAAGT CGCCCGGATG ATCGACCATT CACTCCTGCG ACCGGAACTG 
ACCACCGGCG ACATCGAGAC GGGATGCGCG CTCGCCGCCC GCTACCGGGT CGCCTCGGTG
TGCGTGCGCC CGGCCGACGT CCCGCTGGCC GCCACGGCAC TGGCCGGAAC CGGCGTCCTT
GTCGGCACCG TCGTGGGCTT CCCACACGGC GGCAACGCCA CCGCCGTCAA GGAAGCCGAG
ACCCGCCTGG CGATCGAGCA GGGCGCGACC GAGATCGACA TGGTGCTCAA CATCGGACGG
CTGCGATCGG GCCAGCTGGA CGACGTCGAG GCCGACATCC GCGCGGTCGT CACCGCCGCG
GCCTCAGCCC CGGTGAAGGT GATCCTCGAA AACGCCTACC TCACCGACGA GCAGAAGATC
GCCGGATGCC GGGCCGCCGA ACGGGCCGGA ACCCGCTTCG TCAAGACCTC CACCGGTTTC
GCCGACGGCG GCGCGACCAT GGCCGACCTG CGACTCATGC GCGCGACCGT GTCCGACACC
GTCGAGGTGA AAGCCGCCGG CGGAGTGCGC AGCCTGGACA CCCTGCTCGC CATGGCCGAC
CTCGGCGTCA CCCGGTTCGG CGCCACCGTC ACCGACCGCA TCCTCGACGA CCTCGACCAC
CGGCTGCGCG ACCGCGACGG CTGGACCGCG GCCTAG
 
Protein sequence
MRTVAEVARM IDHSLLRPEL TTGDIETGCA LAARYRVASV CVRPADVPLA ATALAGTGVL 
VGTVVGFPHG GNATAVKEAE TRLAIEQGAT EIDMVLNIGR LRSGQLDDVE ADIRAVVTAA
ASAPVKVILE NAYLTDEQKI AGCRAAERAG TRFVKTSTGF ADGGATMADL RLMRATVSDT
VEVKAAGGVR SLDTLLAMAD LGVTRFGATV TDRILDDLDH RLRDRDGWTA A