| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3001 |
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| Symbol | |
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| ID | 8884200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 3168955 |
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| End bp | 3169665 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | transcriptional regulator, GntR family |
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| Protein accession | YP_003511766 |
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| Protein GI | 291300488 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00183379 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | GTGGCCGAGA CTCAAACCCC CAGGTACCAC GCCATCGAAC AGGCGCTACG CCAACGCATC
CGCGACCTGC CCGCCCACAC GGCGCTGCCG TCCGAGTCGC GGTTGAGCGC CGAGTTCGGC
GTCAGCCGCA TGACGGCCCG GGGCGCGGTG ACCCGCCTGG TCAACGCGGG CCTGGTCTAC
CGGATGTCGG GCCGGGGCAC CTTCGTGGCA CCACCGCCGT CCAACCGACG CGCCGACAGC
CTGATCCGCT TCACCGAACA GATGCGCCGC AGCGGCCGCA CCGCCACCTC GCGGCTGCTC
GGCACCGACA CCCGGGCCGC CACCGAAGCC GAACGCACCG ACCTGCGTCC CGGCAAGAAC
GGCGTGATCG AGATCCGGCG AATCCGGCTC GCGGACGCCA CTCCCATCGC CGTGGAGACC
GCCGTGTTCT CCGCGACCCT GTCCCGGCTG CTCGACACCG ACCTGTCCGT ATCCCTCCAC
ACCCAACTGG CGCGGCTGGG ACGCGTCCCC ACCAGCGGCC ACGCCACCGT CACCGCCGAG
TCCGCGACCG TCACCGACGC CGACCTGCTC GACATCCCCG CAGGCTCGGC GGTACTGGTC
GAACGACGAC TCATCAACGA CCAGCACGGG CATCCCCTGG AGCGCACCGA AAGCCGCTAC
GCCGCCGAAC GCTACCGCCT CGACGTCGTC TTCGACGTCG ACCAAACCTG A
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| Protein sequence | MAETQTPRYH AIEQALRQRI RDLPAHTALP SESRLSAEFG VSRMTARGAV TRLVNAGLVY
RMSGRGTFVA PPPSNRRADS LIRFTEQMRR SGRTATSRLL GTDTRAATEA ERTDLRPGKN
GVIEIRRIRL ADATPIAVET AVFSATLSRL LDTDLSVSLH TQLARLGRVP TSGHATVTAE
SATVTDADLL DIPAGSAVLV ERRLINDQHG HPLERTESRY AAERYRLDVV FDVDQT
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