Gene Snas_2981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2981 
Symbol 
ID8884180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3149888 
End bp3150670 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content66% 
IMG OID 
Producttriosephosphate isomerase 
Protein accessionYP_003511748 
Protein GI291300470 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.322057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.030919 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACC GCAAGCCTCT CATCGCCGGC AACTGGAAGA TGAACCTCAA CCACTTCGAG 
GCCATCGCAC TGGTGCAGAA GCTGGCCTTC AGCCTGGACG AGAAGCAGCT GTCGGACGTC
GAAGTGGTGG TACTGCCGCC CTTCGTGGAC ATCCGCAGCG TCCAGACCGT CATCGACGGC
GACAACCTGC TGCTGGGCTT CGGCGCCCAG GACGTGTCGG CGCACGCCTC GGGTGCCTAC
ACCGGCGAGA TCTCGGCGGC GATGCTGGCC AAACTCGGCT GCACCTACGT GACCGTCGGC
CACTCCGAGC GGCGCCAGTA CCACGGCGAG GACGACAAAC TCGTCGGCGC CAAGGCGAAA
GCGGCGCTGG CCAACGAGAT CACCCCGATC CTGTGCGTCG GCGAACCGCT GCCGGTGCGC
GAATCCGGGG AGCACGTCGA GCACTCGGTG GGCCAGCTGC TGGCCGCGAT CGAGGGACTG
TCGTCCGAAC AGGTCGACAA GCTCGTGGTC GCCTACGAAC CGGTGTGGGC CATCGGCACC
GGCAAGACCT GCGCGCCCGA CGACGCGCAG GAGGTCATCG GCGCGCTGCG CGCGGCGCTG
GCCAAGGACC ACCCCGAGGC CGCCGAGAAG GTACGCATCC TCTACGGCGG TTCGGTCAAA
GCGGGCAACG TCGCACAGAT CATGAAGAAG CCGGACATCG ACGGCGCCCT AGTGGGCGGC
GCGAGCATCG ACGCCGACGA ATTCGTGAAG ATCTGTCGCT TCCCTGAGCA CAACAACGTG
TAA
 
Protein sequence
MSDRKPLIAG NWKMNLNHFE AIALVQKLAF SLDEKQLSDV EVVVLPPFVD IRSVQTVIDG 
DNLLLGFGAQ DVSAHASGAY TGEISAAMLA KLGCTYVTVG HSERRQYHGE DDKLVGAKAK
AALANEITPI LCVGEPLPVR ESGEHVEHSV GQLLAAIEGL SSEQVDKLVV AYEPVWAIGT
GKTCAPDDAQ EVIGALRAAL AKDHPEAAEK VRILYGGSVK AGNVAQIMKK PDIDGALVGG
ASIDADEFVK ICRFPEHNNV