Gene Snas_2972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2972 
Symbol 
ID8884171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3138814 
End bp3140142 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content65% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003511739 
Protein GI291300461 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.737462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.183542 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAACCA CCGACATCGT CAGCACGCCG CGCGAACGCG CGGGCTGGTA CGCCTACGAC 
TGGGCGAACT CGGCGTTTCC CACCACTGTG GTCACGGCTT TTCTGGGTCC GTACCTGACG
GCCATCGCCA AGGTCGGCGC CGACGGCAAC GGTGACATCG ACGTCTATGG ACTGTCCATC
AGCGCCAAGG AACTGTGGCC CTATGTCACC AGCCTGTCGG TGATCCTGCA GGTCGTGGTG
ATGCCGGTGG TCGGCGCGAT CGCCGACCGC ACCTCCCGCA AGAAGCGGCT GCTGTCCATC
ATGGCCTACA CCGGGGCGGC CTCCACCTGC GGACTGGTGT TCCTCACCGG CGACCGGTAC
ATGTTGGGGG CGTGGCTGTT CCTCATCGCC AACGTCTCCT TCGGCGCCAG TGTCGTCGTG
TACAACTCCT TCCTGCCGCA GATCGCCGCC GAACCGGACC GCGACAAGGT GTCCAGCCGG
GGCTGGGCCA TCGGCTACCT GGGCGGCGGC ACGCTGCTGC TGTTCAACGT CATCGCGGTC
GTGTTGGGCG GCAGCGAGAA CCAGGCCGAC ATGGCCCGCT GGTCGCTGGT GTCGGCGGGC
GTGTGGTGGG CGGGGTTCAC GACGCTGACG GTGGCGTGGT TGCGCGACCG TCCGGCACTG
GAGGGTGAGT ACCGCGGGTT CGTCCTCACC GCCGGGTTCA AACAGTTCTG GCGCACCCTG
AAGGACATGC GGAACTATCC GCTGAGCATC TTCTTCCTGA TCGCGTTCCT GGTCTACAAC
GACGGCATCC AGACCGTGTT CAACATGGCC GGGACCTACG GCGCCGAGGA ACTGGGTTTC
GAACTCGACG CGCTCATGCC GGTCATCCTG CTGGTGCAGT TCGTGGCCTT CGGCGGTGCG
ATGGTCATGG GTTGGCTGGC GAAACTGTAC GGCGCCAAGG CGACCGTGCT GGGCAGCCTG
CTGGTGTGGG TGGCGATCGT CGTGTTCGCC TACTTCGTCC CGGCGGAGAA CTTCGCGATG
CTGTTGATCA TGGGCGTGGG CATCGGACTG GTCCTGGGCG GTTCGCAGGC GCTGAGCCGG
TCCATGTTCA GCCAGCTGAT CCCCAAGGGC AAGGAGGGCG AGTACTTCGG TCTGTACGAG
ATCTCCGACC GGGGCACCAG CTGGATGGGG CCGTTGCTGT TCGGATTGGC GATCGCCATG
ACCGACAGCT ACCGGATCGC GATCCTGTCG CTGATCGTGT TCTTCGCCCT GGGCTTCGTC
CTGCTGTTGC TGGTGCCGGT GCGCAAGGCC ATCATCGCGG CGGGCAACAC GCCACCGGCG
AAGGTCTAG
 
Protein sequence
MTTTDIVSTP RERAGWYAYD WANSAFPTTV VTAFLGPYLT AIAKVGADGN GDIDVYGLSI 
SAKELWPYVT SLSVILQVVV MPVVGAIADR TSRKKRLLSI MAYTGAASTC GLVFLTGDRY
MLGAWLFLIA NVSFGASVVV YNSFLPQIAA EPDRDKVSSR GWAIGYLGGG TLLLFNVIAV
VLGGSENQAD MARWSLVSAG VWWAGFTTLT VAWLRDRPAL EGEYRGFVLT AGFKQFWRTL
KDMRNYPLSI FFLIAFLVYN DGIQTVFNMA GTYGAEELGF ELDALMPVIL LVQFVAFGGA
MVMGWLAKLY GAKATVLGSL LVWVAIVVFA YFVPAENFAM LLIMGVGIGL VLGGSQALSR
SMFSQLIPKG KEGEYFGLYE ISDRGTSWMG PLLFGLAIAM TDSYRIAILS LIVFFALGFV
LLLLVPVRKA IIAAGNTPPA KV