Gene Snas_2844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2844 
Symbol 
ID8884043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2993702 
End bp2996086 
Gene Length2385 bp 
Protein Length794 aa 
Translation table11 
GC content69% 
IMG OID 
Producthistidine kinase 
Protein accessionYP_003511612 
Protein GI291300334 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.27066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.363063 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTTG GCGTGCGCAT AACCAAGAAG ATCGGTTTGC TGGTGGCGGT GCCACTGGTC 
GCCGCGATCT CGTTCGCCGC GCTGGCGGCG TCGATCACCG GTGGCCAGGC GCTGCAGGCG
GACTACCTGC GCGGACTGGT GGACACCAGT GGCGCGGCCG GAAAGCTGGC CGGTGACCTG
AGCGCCGAGC GGGCCTCGGC GGTGTCGACC CTGACCTCGG ACTCCTCCAA GGCCAGCCAG
TCGTTCGCCA AGAACATCCG GGAATCCGAC GAATCGGTCG AGGAGTACAA GAAGCTGCGG
GCCGAACTGG ACCCGGAGGC CGAGTCGACC GAGAAGCTCC TGACCCGTAT CGACACCCAG
CTGGAACGGC TCGACTCGGT GCGTGAGTCG GTGGGCACCA AGCGGCAGAC CGCCTCCTCG
GTCGCCTTCG TCTACCGCAT CGTCATCGCC GACCTGTTGG CGTACCGCGA TTCCGTCACG
CAGGTCGGTG AGGCCCCGGC CGAGGTCGCC GACGAACTGC GCGCCGGGTC CACCCTGTCG
CGTGCGATCG AGTTCGTCGG CCTGCAGGAG GTCGCGGTGC TGCGCGCCGG GCCCGGCAAG
ACCCTGACCC CGTCGGACGC CGAGGAGATC GCCGCGACCC GGCTGGGCTT CGACGACGCG
ATGCTCACCT TCGACCGGCT GACCACCACC GAATGGCAGA CCCTCGTGGA ACGGGCCCAG
ATCGATGAGC AGGGGGTCGC CGCGACCAAA CTCGAACGCG ACATCGCCCG CATCCACCAC
GGCGAGAAGC TCGACGTGGA CCCCGGCAAG TGGACCGACC TGATGGATTC CCGCGCCAGC
GCCTTGCTGA AGGTCGAAGA GGAGATCGAC CAGGACAACA GCGAAGCGGT CACCGCGTTG
CGCGACGCCC AGGTGTGGGT GACCATCATC GAGACCGTCG CCGTCACCCT GGCCGTGATC
GCCGCCATCA TCCTGGCGCT GTGGCTGGGT CGTCCGGTCG TGCGAGGACT GCGCAAGCTG
CGCGACGCCG CCCACCTGGT GGCCTCGAAG GAACTGCCCG ACGCCGTCGC CCGGCTGGAC
GACCACGAGA TCCTCGGTGA GCTGACCCCC GAACAGTTCG CCGACGCGAT GGACCCGCCG
GTCAAGGTGT CCGGAAAGGA CGAGCTGGCC GAGGTCGGCA GCGCCTTCAA CGAGGTGCAC
CGCGAGGCGG TCCGGGTCGC GGCCCAGCAG GCGCTGCTGC GACTCCACAT CGGTTCGATC
TTCGTCAACC TGGCCCGCCG CGGCCACGCC CTGACCGGGC GGCTCACCGC CGAGATCGAC
AACGCCGAGA GCCGCGAGCT CGACCCCGAG CGACTGGAAC GACTGTTCAC CCTGGACCAC
CTGGTGACCC TGCTGGGTCG CTCCAACGAC AGTCTGCTGG TGCTGGGCGG TACCTCCCCG
GCGAAGGTCC GGATGGCCGA CGAACCGCTC GGCGACGTGC TGACCGCCTC GCAGAGCCAG
ATCGAGCAGT ACACCCGGAT CCGGATGGCG TCCATCGACA CTGGACTCGC GGTGCGGGCG
GCCATCGTGG ACGACGTCGT GAAGCTGCTG GCCGAACTGA TGGACAACGC CACCCGCTAC
TCGCAGCCCG AGGTCGTCGT CGACGCGCGG GCGCTGGCCG ACCGGCTGAT CATCCAGATC
AGCGACTCCG GCATCGGCAT GGAACCGGCC AAGATGGACT CCATCAACGC CCGGCTGGCG
ACCAAACCGC CGCTGGACCT GGAAGCCGTG CGCTCCATGG GCCTGACCGT GGTCGGGCAC
ATCGCGTCCC GGCTGGGCAT CTCGGTGCAG CTGCGGGTGG GTCACCCGCG CGGCACCATC
GCCGAGGTCA CCATGCCCGC CGCGCTGCTG ACCGCCGACA CCCGAGACTC CACCGAGGTC
GCCGAGGCGA CCCGGCGGCC GGCGGAACGC CGCCCGGAGC AGACCAGTCG TCCGGTGCCC
CGGCTGTTCC GCGACGCCAA CACCATGCCG TCGCGCAACA CCCCGGTCGC CGACGATTCC
GCGTTGGTGC CGGTGGTGCA CTTCGACAAG GCGCACCTCA TGGAGTCGAC GCGGGAACAC
CCGGTCGTTC CCAAGCCCCG CAACCCGTTC GACGACGGAT GGCGGGCCGC CGAAGAGGCG
TCCAAACCGA TGTCGCCGCC CGCCGAAGGG CAGCTACCGC GCCGTACTCC GGGCAACCGC
CTGGTGCCCG GCGGCGAAGT TCCCGACACC ATCGAAGGTG TAACCGCGCA AGATCACCGG
GACCCGGCGG CGATCAGCGC GACGTACGCC GCATACGCTC GTGGTCGCTC CAACAGTGGA
GTTTCCCCAT TGAACACCCC CAGTGGATCG AGGAGTGCTT CATGA
 
Protein sequence
MAVGVRITKK IGLLVAVPLV AAISFAALAA SITGGQALQA DYLRGLVDTS GAAGKLAGDL 
SAERASAVST LTSDSSKASQ SFAKNIRESD ESVEEYKKLR AELDPEAEST EKLLTRIDTQ
LERLDSVRES VGTKRQTASS VAFVYRIVIA DLLAYRDSVT QVGEAPAEVA DELRAGSTLS
RAIEFVGLQE VAVLRAGPGK TLTPSDAEEI AATRLGFDDA MLTFDRLTTT EWQTLVERAQ
IDEQGVAATK LERDIARIHH GEKLDVDPGK WTDLMDSRAS ALLKVEEEID QDNSEAVTAL
RDAQVWVTII ETVAVTLAVI AAIILALWLG RPVVRGLRKL RDAAHLVASK ELPDAVARLD
DHEILGELTP EQFADAMDPP VKVSGKDELA EVGSAFNEVH REAVRVAAQQ ALLRLHIGSI
FVNLARRGHA LTGRLTAEID NAESRELDPE RLERLFTLDH LVTLLGRSND SLLVLGGTSP
AKVRMADEPL GDVLTASQSQ IEQYTRIRMA SIDTGLAVRA AIVDDVVKLL AELMDNATRY
SQPEVVVDAR ALADRLIIQI SDSGIGMEPA KMDSINARLA TKPPLDLEAV RSMGLTVVGH
IASRLGISVQ LRVGHPRGTI AEVTMPAALL TADTRDSTEV AEATRRPAER RPEQTSRPVP
RLFRDANTMP SRNTPVADDS ALVPVVHFDK AHLMESTREH PVVPKPRNPF DDGWRAAEEA
SKPMSPPAEG QLPRRTPGNR LVPGGEVPDT IEGVTAQDHR DPAAISATYA AYARGRSNSG
VSPLNTPSGS RSAS