Gene Snas_2708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2708 
Symbol 
ID8883906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2846839 
End bp2848383 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content67% 
IMG OID 
Productcellulose-binding family II 
Protein accessionYP_003511477 
Protein GI291300199 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.494794 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAACAT CATCGCGTCT GGCGGCGCTA CTCGTGCTCG CCCTCCTCAC CTCCTTCGCC 
CTGGCGGCCC CGGCCCACGC CGCCGCGACC ACCGCGTCCT TCACCAAGAC CTCCGACTGG
GGTTCGGGTT ACGAAGGCAA GATCACCATC AACAACGCGT CCTCCTCGGC CATCGACGGC
TGGAAGGTCG AGTTCGACCT GTCGTCCGGT TCCTCGGTCG GCACCTACTG GGACGCCCTG
CACACCAAGT CCGGCGACCG CAACACCTTC ACCCACCGCG AGTACAACCG CAACATCGCC
GCGGGTGCCA CGGTCAGCTT CGGCTTCATC GTCAGCGGCA CGGCGACCCC GACCAACTGC
ACCATCAACG GCGCCTCCTG TGGCGGAGGC GGCGATCCCG GCGCGCCCAG CGCCCCCACC
GGGCTGCGGT CGACCGGCAC CACCAACTCC TCGATCAGTC TGTCGTGGAC GGCCTCCGGC
GGCAGCGTCA CCGGTTACCG CGTCTACGAG GGCGGTTCCG TGAAGACCAC GGTCTCGGGC
ACCTCCGCGA CCATCTCGGG ACTGGCCACC TGCTCGTCGC ACACCTACAC CGTCGCGGCC
TACAACGGCT CGGGCGAATC GGCCAAGAGC GCACCCGTCA GCGCCACCAC CAGCGGCTGC
ACCGGCGGCG GGACCATGAA GGCCGCGCCG TACCTCTACA TGGGATGGGG CAACCCGCCC
AGCCCGTCGA CGGTCATGAA CGCCACCGGC ATCAAGTACT TCACGATGGC GTTCATCCTG
TCCTCCGGTG GCTGCAACCC GGCCTGGGAC GGACAGCGGC CGTTGCAGGG CAGCGCCGAC
GCGACCGCGA TCTCGCAGAT CAAGGCCGCC GGTGGCGACA TCATCCCGTC CATCGGCGGT
TGGAGCGGCA ACAAGCTGGG GCCCAACTGT TCCAGCGCCG AAGCGCTCGC CGGGGCCTAC
CAGAAGGTGA TCGACGCCTA CAACCTCAAG GCCATCGACG TCGACATCGA GAACACCGAC
GAGTTCGAGA ACGCCACGGT GCAGGACCGC ATCCTGGGCG CGCTGAAGAT CGTCAAGCAG
AACAACCCCG GGATCAAGAC GATCCTGACC TTCGGCACCA CCACCAGCGG ACCCAACAGC
TGGGGCAACC GGCTGATCCA GCGAGCCGCC GAACTCAACG CCAATGTGGA CGTGTTCACC
ATCATGCCGT TCGACTTCAA CGGCGGCGCG AACATGTACC AGAACACCGT CAACGCCTCC
GAGGGACTGA AGAACTCGCT CAAGACCTCC TTCGGCTGGT CCGACTCGGT GGCGTACTCG
CGGATGGGGA TCTCGGGCAT GAACGGCCTG TCCGACCAGC AGGAGCTCAC CAGCCCCAGC
ACCTGGAACC AGATCACCCA GTGGGCCAAG TCCAAGGGCC TGTCGCGGCT GGCGTTCTGG
GCGGTCAACC GGGACCGGCC GTGCCCGGGC GGCGGCGTGG TGTCGCACTG CAGCGGCATC
GACCAGCAGC AGTGGGAGTT CACCAAGATC ACCGCGGGGT TCTGA
 
Protein sequence
MRTSSRLAAL LVLALLTSFA LAAPAHAAAT TASFTKTSDW GSGYEGKITI NNASSSAIDG 
WKVEFDLSSG SSVGTYWDAL HTKSGDRNTF THREYNRNIA AGATVSFGFI VSGTATPTNC
TINGASCGGG GDPGAPSAPT GLRSTGTTNS SISLSWTASG GSVTGYRVYE GGSVKTTVSG
TSATISGLAT CSSHTYTVAA YNGSGESAKS APVSATTSGC TGGGTMKAAP YLYMGWGNPP
SPSTVMNATG IKYFTMAFIL SSGGCNPAWD GQRPLQGSAD ATAISQIKAA GGDIIPSIGG
WSGNKLGPNC SSAEALAGAY QKVIDAYNLK AIDVDIENTD EFENATVQDR ILGALKIVKQ
NNPGIKTILT FGTTTSGPNS WGNRLIQRAA ELNANVDVFT IMPFDFNGGA NMYQNTVNAS
EGLKNSLKTS FGWSDSVAYS RMGISGMNGL SDQQELTSPS TWNQITQWAK SKGLSRLAFW
AVNRDRPCPG GGVVSHCSGI DQQQWEFTKI TAGF