Gene Snas_2649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2649 
Symbol 
ID8883844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2785118 
End bp2786317 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content70% 
IMG OID 
Productsodium/hydrogen exchanger 
Protein accessionYP_003511419 
Protein GI291300141 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.382226 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCTGT TCGAGCTGGG CGGAGTCATC CTCGGGCTGG GCGTGCTGTC GGCGGTGGCC 
GGGCGGTTCG GCATCTCGCC GATCCCGCTG TACCTGCTGG CCGGGCTCGG CTTCGGCCTC
GGCGGAGTGG CACCGCTGGA CGCCGCCGAG GGCTTCATCG AGGTGGGCGG CGAGATCGGC
GTCGTGCTGC TGCTGTTCGT CCTGGGCCTG GAATACACGG TCGGCGAACT GTTCGGGACG
ATGCGCAAGG GCGCCCCGGT CGGGGTGCTG GACCTCGTCA TCAACGCCGC CCCCGGCGTC
GGGATCGCGC TGCTGTTGGG CTGGGGCCCG GTGGCCGCCA TGGTCATGGG CGGCGTCACC
TACGTGACCT CCTCGGGTGT GACCGCCAAG GTCCTGGGCG ACCTGGGCTG GCTCGGTAAC
CGCGAAACTC CCACGGTCCT GTCCATCCTG GTGATGGAGG ACCTGGCCAT GGCCCTGTAC
CTGCCGATCG TCACCACCCT GCTGGCCGGT CTGGCACTGG CGCAGGCCAG CCTCGGCCTG
GCCATCGCCG CGGCGGCGGT CACCGTCGCG CTGCTCATCG CCGCGAAGTT CGGTGGCATC
GTGGAGGCGT TCCTGCGCAG CCCCAGCAAC GAGATCCTGG TGCTGAAGGT GCTGGGTCTG
GTGCTGCTGA TCGCGGGCCT GGCCGAGCAC GTCCACGTCT CGGCGGCCGT GGGCGCCTTC
CTGGTCGGCA TCACGCTGTC GGGGGAGCTG GCCCACAGCG CCCGCGAACT CATCGCCCCC
CTCAAGGACG TGTTCGCGGC GATCTTCTTC GTCGCCTTCG GTCTCCAGAC CGATCCCGAG
ACACTGCCGC CGGTGCTGGG CATCGCGGTG GCGCTGGCCG TCGTCGGCAT CGCCACCAAG
ATGACCACCG GCTGGGTCGC CGCCCGCCGC GCCGGAGTCG GATCCACCGG TGCGCTGCGC
GCCGGAACCC TGCTGATCCC GCGCGGCGAG TTCAGCATCG TGATCGCGGG CCTGGCGGTG
ACCTCGAAGA TGGTCGACCC CAAACTCGGT CCGTTGGTCG CCGCGTACGT ACTGGTGCTC
ATCGTCCTGG GCCCGCTGCT GTCGCGGCTG GTGGAGCCGG TGGCCAAGGG CCGCAGGCGC
CGCAAACGCA AGGCCGCCGC GAAGCAGCGG CAGGATTCGC TCGCCGAAAG TATTGGTTAA
 
Protein sequence
MVLFELGGVI LGLGVLSAVA GRFGISPIPL YLLAGLGFGL GGVAPLDAAE GFIEVGGEIG 
VVLLLFVLGL EYTVGELFGT MRKGAPVGVL DLVINAAPGV GIALLLGWGP VAAMVMGGVT
YVTSSGVTAK VLGDLGWLGN RETPTVLSIL VMEDLAMALY LPIVTTLLAG LALAQASLGL
AIAAAAVTVA LLIAAKFGGI VEAFLRSPSN EILVLKVLGL VLLIAGLAEH VHVSAAVGAF
LVGITLSGEL AHSARELIAP LKDVFAAIFF VAFGLQTDPE TLPPVLGIAV ALAVVGIATK
MTTGWVAARR AGVGSTGALR AGTLLIPRGE FSIVIAGLAV TSKMVDPKLG PLVAAYVLVL
IVLGPLLSRL VEPVAKGRRR RKRKAAAKQR QDSLAESIG