Gene Snas_2612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2612 
Symbol 
ID8883807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2747964 
End bp2748908 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content68% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003511384 
Protein GI291300106 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.472941 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACTCCA CCCCCGCCAT CGACATCGAG CGGTTGACCA AGACGTACGG CTCGGGCGCC 
CGGCCCGCCG TGGACGACGT CAGCCTGCGG ATTCAGCCGG GCACCGTTTT CGGATTCCTG
GGGCCCAACG GGGCCGGGAA GACCACCACC ATCAAGATCG CGGCGGGCCT GCTCGCCGCC
AGCGCCGGAA CCGTGCGGCT CAACGGATAT GACGTTGCCG CCCGGCGGTC GGCGGCGATG
GCGCAGATCG GCGCCGTCCT GGAGGGATCG CGCAATGTGT ACTGGACACT GACGGCCTGG
CAGAACCTCA TCTACTTCGG ACGGTTGAAG GGGTTGCGGA AGGCGGAGGC TCGCGGTCAG
GCCACCGAGT TGCTCACCGA TCTGGGCTTG TGGGATCGGC GCCATGACCG GGTCGGCGAC
TTCTCGCGCG GTATGCAGCA GAAGGTCGCC ATCGCGGCGG CGCTGATCGC CGATCCGCCG
ATCGTGTTGC TGGACGAGCC GACGTTGGGG CTCGACGTGG CCGCCACCCG GACCGTCAGG
AACTGGATCG CGACGCTGTC GGAAGACCGG GGCAAGACGA TTCTGCTGAC CACGCATCAG
CTCGACGTGG TGGCGGAGTT GTGCGATCGG GTGGCGGTGA TCCGTGAGGG GACCATCGTC
GCGGATCAGG CCACCGGGGA GCTGTTGTCG CGGTTCCGGC GTCGTGACAG CTACGAGGTC
CACATTGAGG GTGTTCCCGC GTTGCCGCCG CTGCCGGGCG GGTTCACCGC CGAGGAGAGT
GGCGATTCGA CCGTGATCGC CGGGCGGGTG GACGATCCGC GGGTCGTCTA TCAGCTGCTG
GAGCGGCTTG GTGAGCGCGG CATCGTGCTG CGGTCGCTGG CGCAGGCACA GCCGAGCCTG
GAGGACGTGT TCCTCAGTCT CGTCGAGGAG CCCGCCCATG TCTGA
 
Protein sequence
MNSTPAIDIE RLTKTYGSGA RPAVDDVSLR IQPGTVFGFL GPNGAGKTTT IKIAAGLLAA 
SAGTVRLNGY DVAARRSAAM AQIGAVLEGS RNVYWTLTAW QNLIYFGRLK GLRKAEARGQ
ATELLTDLGL WDRRHDRVGD FSRGMQQKVA IAAALIADPP IVLLDEPTLG LDVAATRTVR
NWIATLSEDR GKTILLTTHQ LDVVAELCDR VAVIREGTIV ADQATGELLS RFRRRDSYEV
HIEGVPALPP LPGGFTAEES GDSTVIAGRV DDPRVVYQLL ERLGERGIVL RSLAQAQPSL
EDVFLSLVEE PAHV