Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_2560 |
Symbol | |
ID | 8883755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 2699327 |
End bp | 2699917 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003511333 |
Protein GI | 291300055 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.199189 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.158626 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCGA GTGGTCCACT CACGTCGGAC CGGATACTCG AAGCGGCGGA GGACGTCCTC CGCCGCTTCG GTCCCGACAA GACCACCGTC GTCGACGTGG CCCGGCAGCT GGGTGTCAGC CACGGCAGTG TCTACCGGCA TTTCCCCAGC AAGGTCGCGT TGCGCGACGC GGTCGCCGAG CGCTGGCTGG ACCGGATCTC GCGACCGCTG GCCGACATCG CCGCCAGAAG CGGCCCGGCC GCCGACCGGT TGCGGGAGTG GATGCTGCGG CTGGCCACCG CGAAACGCGA GCTGGCGGGG TCCGACCCGG AACTGTTCGC CACCTACTTC CGGCTGACCT CCGAATCGCG GGGAGTCGGT GCGGCGCACG AGGAACATCT GGCCCGGCAA CTGTCGGGGA TCATCGCCGA CGGGGTTCGT GCCGGGGAGT TCACGGTGGA CGATCCCGAG CGCAGCGGCT GGGCGGTGTT TCGGGCTTCG GCGCGTTTCA ACCATCCGCT GCACGCCGCC GAGTGGAACC GGCCGGGGTT CGAGGCCGAC CTGGCCGATC TGTGTGACCT GCTGCTGCGG GGACTGAAAA CGGAGGGCTG A
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Protein sequence | MKPSGPLTSD RILEAAEDVL RRFGPDKTTV VDVARQLGVS HGSVYRHFPS KVALRDAVAE RWLDRISRPL ADIAARSGPA ADRLREWMLR LATAKRELAG SDPELFATYF RLTSESRGVG AAHEEHLARQ LSGIIADGVR AGEFTVDDPE RSGWAVFRAS ARFNHPLHAA EWNRPGFEAD LADLCDLLLR GLKTEG
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