Gene Snas_2556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2556 
Symbol 
ID8883751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2696094 
End bp2697344 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content71% 
IMG OID 
Producthistidine kinase 
Protein accessionYP_003511329 
Protein GI291300051 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.121674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0692801 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG CCAACGACCA GTGGGTGCGA CGGACGTTCA GCGTCCTCAT CGACACCGGT 
CGCGTCGGCG ACCCGTCCTG GCGCGGTTCA CCGTGGACGC TGCTGGCCCT GTTCGGCCCC
GGCTCGGTGC CGTTCGCCGT CCTGATGCTC CTCGTCCAGA ACCAGGTACT GCGCTCCGAG
TACTCCGTCG GCTGGCTGGC GCTTCCGCTG GCCGTGGCCA ACGCGGCGTC GATCGTGCTG
GCGCGTTTCC ATCCGGTGTT GGCGTGGCTG CTGCTCAACA CGACCTTCGT CGCCACCGCG
CTGTTGACCC CGGTCCGGAC CGGCGAACCG TGGCCGTGGA CGGTCGCGGG ACTGTTCGCG
CTGTTGATCG TCCAGTTCGG TGTCGCCCGC GACTGCCGCG TCCGGGCGGC CGTCGGCACC
TGGTCGGTCG GTTTCCTGCT CGTCCTGTGG GCCAGCTCCC GCTTCAACAC CGAGACCGCG
GCGCAGAACC TGACCCTGGT GTCGCTGCTG TCGGTGGCCG CTGCCGCGAT CGGCCTGGCC
GTGCGGGCCA CCCGCCGTGC CCAGCGCCGC ATCGGCGAGG AGGAACGCCT CACCGCCGCC
GAACGCGCCC GCCGCGAACA ACTCGAGGAC CGCGCCCGCA TCGCCCGCGA ACTCCACGAC
GTCGTGGCGC ACCATATGTC GGTGATCTCC GTACAGGCCG CCACCGCCGA GTACCGGCTG
CCGGAACTGC GCGAGGACGT CCGCGACGAG TTCCGCTCCA TCGGCGGGCA GGCACGGCAG
TCGCTGACCG AGATGCGGCG GCTGCTGGGG GTGCTGCGCG GCGAGAACGA GGCCGCCGAG
ACCGCTCCCC AACCCGACCT CGACCGGCTG CCCGAACTCG CCGAATCCGT GCGGCGAGCC
GGAATCGAGG TCTCCCTCAC CGTCAACGTC CCCGAACCCC CGTCCGATGC CGTCGCTCTG
ACCGGCTACC GGGTCGTCCA GGAAGCACTG AGCAATGTGG TGCGATACGC TCCCGGCGCG
GCCACCACCG TCACCGTCGC GACCACCGCG ACGGCCCTGC TCGTGGACGT CGAGAACGAA
CCGCCGCCCG CCACCCCCGA CCCGACCGGG ACCGGCGGCG GCTACGGTCT CACCGGTATG
CGCGAACGCG TCGTCCTGCT GGGCGGCGAA CTCACCGCCG AAGCCACCGC CGAAGGCGGC
TTCGCCGTAC ACGCCCGGAT CCCTCTTGAG CCCGACGGGG AACAGCCATG A
 
Protein sequence
MTTANDQWVR RTFSVLIDTG RVGDPSWRGS PWTLLALFGP GSVPFAVLML LVQNQVLRSE 
YSVGWLALPL AVANAASIVL ARFHPVLAWL LLNTTFVATA LLTPVRTGEP WPWTVAGLFA
LLIVQFGVAR DCRVRAAVGT WSVGFLLVLW ASSRFNTETA AQNLTLVSLL SVAAAAIGLA
VRATRRAQRR IGEEERLTAA ERARREQLED RARIARELHD VVAHHMSVIS VQAATAEYRL
PELREDVRDE FRSIGGQARQ SLTEMRRLLG VLRGENEAAE TAPQPDLDRL PELAESVRRA
GIEVSLTVNV PEPPSDAVAL TGYRVVQEAL SNVVRYAPGA ATTVTVATTA TALLVDVENE
PPPATPDPTG TGGGYGLTGM RERVVLLGGE LTAEATAEGG FAVHARIPLE PDGEQP