| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2543 |
|---|
| Symbol | |
|---|
| ID | 8883738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 2682592 |
|---|
| End bp | 2684043 |
|---|
| Gene Length | 1452 bp |
|---|
| Protein Length | 483 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | Xanthine/uracil/vitamin C permease |
|---|
| Protein accession | YP_003511317 |
|---|
| Protein GI | 291300039 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0284041 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0397095 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCA GTACAACCAG GGCCGCCACC CGCCCCAAAT CCGGTGGTGA GCCCGGCTGG
TTCGACCGGT GGTTCCAGAT CACCGAACGC GGCAGCAGCG TCGGCCGCGA AGTCCGCGGT
GGCCTCACCA CCTTCATGGC GATGGCCTAC ATCATCGCCC TCAACCCCCT GATCCTGTCC
GGCGCCAAGG ACGTCAACGG CGAGTCACTG TCGGTCGTCG GCGTCACCAC CATGACCGCG
TTCTCGGCGT TCGTGGCCAC CCTCGTCATG GGCGCGCTGG GCCGGGTGCC GCTGGCACTG
GCCGCCGCGC TGACCGTCAA CGCCGTGGTC GCCTACCAGA TCGCCCCGCA GGTCACCTGG
CCGCAGGCCA TGGGCCTGGT CGTCATCCAG GGCCTCGTGA TCGTGCTGCT GGCCGCCAGC
GGCGTCCGCA CCATGATCAT GAACGCGATC CCGCTCGACC TCAAACACGC CATCGGCGTC
GGCCTGGGGC TGTTCATCGC CCTCATCGGA CTCGTCAACG CCGGTTTCGT CACCCGCCGT
CCCGACGCCG ACGGCACCTC GGTGCCGGTG ACGCTGGGCC AGGGCGGCGT CCTCAAGGGC
TGGCCGATCG TGGTGTTCGT CGTCGGCATG CTCATCATCA TCGCGCTGTG GGCCCGCAAG
ATCCCCGGCT CGGTGCTGCT GGGCGTCGTG GTGGCCACGG TGCTGGCCAT CATCATCGAG
TCGACGCTCC ACCTTGGATC GAAGATCTGG GGGGTCGTCA CCCCGGCGAT GCCCGAGAAG
GTCGCGCAGG CCCCGGACTT CTCACTGTTC GGGCAGGTCG ACGTCATCGG CGCCATCACC
CAGATCGGCT TCGTGTCACT GATCGTGTTC GTCTTCACGC TGGTGCTGTC GGGCTTCTTC
GACGCCATGG GCACCGTGAT CGCGGTGTCC GACGAGGCCG GACTGGTCGA CAAGGACGGC
CAGCTGCCCG GCATCGGACG GGTGCTGTCC ATCGACGGCG CCGCGGCCAC CTTCGGCGGC
ATCACGTCCT CCTCGGCCAA CACCGTGTTC GTCGAGTCGG CGGCCGGGGT CGGCGACGGC
GCCCGCACCG GTCTGGCCAG TGTGGTCACC GGCGGCATGT TCGGTCTGGC GATGTTCTTC
GCGCCGCTGG CCACCGTGAT CCCGCAGCAG GCCGCCGCCC CCGCGCTGGT CCTGGTCGGC
GGTCTCATGT GCGCCCAGGC CAAGAACATC GACTGGAAGA ACACCGAGAT CGCCATCCCG
GCGTTCCTGA TCCTGGCCAT CACCCCGTTC ACCTACTCGG TGACCGCCGG GGTCGGTGCC
GGGGTGATCG CCTACGTCGT CATCAAGGCC GTCAACGGCA AGTGGCGCGA ACCCGGCTGG
CTGCTGTGGA TCGTGTCGCT GGTCTTCGTC GCCTACTTCG GAATACACAC GATCGAGAGA
CTGGTGCAGT AG
|
|---|
| Protein sequence | MSSSTTRAAT RPKSGGEPGW FDRWFQITER GSSVGREVRG GLTTFMAMAY IIALNPLILS
GAKDVNGESL SVVGVTTMTA FSAFVATLVM GALGRVPLAL AAALTVNAVV AYQIAPQVTW
PQAMGLVVIQ GLVIVLLAAS GVRTMIMNAI PLDLKHAIGV GLGLFIALIG LVNAGFVTRR
PDADGTSVPV TLGQGGVLKG WPIVVFVVGM LIIIALWARK IPGSVLLGVV VATVLAIIIE
STLHLGSKIW GVVTPAMPEK VAQAPDFSLF GQVDVIGAIT QIGFVSLIVF VFTLVLSGFF
DAMGTVIAVS DEAGLVDKDG QLPGIGRVLS IDGAAATFGG ITSSSANTVF VESAAGVGDG
ARTGLASVVT GGMFGLAMFF APLATVIPQQ AAAPALVLVG GLMCAQAKNI DWKNTEIAIP
AFLILAITPF TYSVTAGVGA GVIAYVVIKA VNGKWREPGW LLWIVSLVFV AYFGIHTIER
LVQ
|
|---|
| |