Gene Snas_2500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2500 
Symbol 
ID8883695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2642713 
End bp2643147 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content63% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003511275 
Protein GI291299997 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.492618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGTGGA TTATATGGTT GGCGGTGGCC GTGGCACTGG GCATCGCCGA ACTGTTTACC 
TTGACATTTG TGCTGCTCAT GATCGGGGCG GGAGCGGCGG CGGCTTCGCT GGCGGCGGCA
CTGGGTTCCC CGGTGGAGCT TCAGGGCCTG GTCTTCGTCG TGGTGTCGGT GCTGTCCCTG
ATCGGCATCA GACCGTGGGC GAAGAAACTA CGGGACAACC GTTCGGGCCC GGACGCGAAG
ATCGGTCTGC AGGCCCTGGA GGGCGCGGAG GCCCTCGTAC TGGAGCGGGT CGACTCCCAG
CACGGACTCA TCAAAGTGCA GGGTCAGGAG TGGACGGCGC GCAGTTACGA CGGCAAACAA
GTACTGGAAC AAGGAGAAGA AGTGAACATA GTGGAGATAC GCGGGGCGAC GGCTATGGTC
TGGAGGCAGC CATGA
 
Protein sequence
MAWIIWLAVA VALGIAELFT LTFVLLMIGA GAAAASLAAA LGSPVELQGL VFVVVSVLSL 
IGIRPWAKKL RDNRSGPDAK IGLQALEGAE ALVLERVDSQ HGLIKVQGQE WTARSYDGKQ
VLEQGEEVNI VEIRGATAMV WRQP