Gene Snas_2324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2324 
Symbol 
ID8883519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2465834 
End bp2467336 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content73% 
IMG OID 
Productfumarate lyase 
Protein accessionYP_003511104 
Protein GI291299826 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.387168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACCGT CTTCTTCGCC GTCTGAGTGG GGCGAGCCGA GCATCGCGCC GCCGGTCGAC 
GCGAGCGATC CGTTCGCCGT TGTGTTCGGC GATCCTCGGG TGGACCAGGC TTGCGGGACA
GACGGCTGGT TGGGCGCCAT GCTGGACGCC GAGCGGGCGC TGGCCGAAGC GCTCGCCGAG
GCGGAGCTCG TTCCGGTCGC GGCGGCCAAG GCCATCGGGG AGGCTTGCCG GTCCGGGGGC
GTCACCAGTG CGGTGTTCGC ACACGCTTCG TCCGCATCTC CGGTGGTGCC GCTTGTGAAC
ACGCTCGCCG AAGCCGTGCC GCTGGAGGTT CGCGGCTGGG TGCACTACGG CGCGACCAGC
CAGGACATCA TGGACACCGC GATGATGCTG GTGGCGCACC GTGCCACCGC CGTCATCGTC
GACAATCTCG CCCACGCGGC CGAAGCCGCC GCATCGCTGA CCGAGCGGCA CCGCGACACG
CTCCTCATCG GACGCACTCT CGGCCAGCAC GCCGCCCCCA CAACCTTCGG AGCGGTGGCC
GCCGGTTGGC TGAGCGGCAT CGACGCGGCC CGCGACCAGC TTCGCTCCGC CCGCTTTGAG
CTGGCCGCGC AACTGGGCGG GCCCGTCGGC ACCCTGGAAC CCTATGGCAC GCAAGGGTTG
CGGGTGCTCG CCGACTTCGC CCACCGGCTG GGGTTGGCCG ATCCCGGCCT GCCCTGGCAC
ACCGAGCGAA CCCGCGTGAC CCGGCTGGCG TCGGCGCTGG CCACGGGCGC GGGGACGCTG
GCGAAGGTCG CCCACGATGT GTCGGTCCTC GGCTCCAGCG ATGTCGGCGA ACTGCGAGAG
GGCTCCGGCG GCGGCTCCAG CGCGATGCCC CACAAGCACA ATCCGGCCGA CAGCGTCCTG
GTGCTGGCGA ACGTGCGCCG CACCCCCGGC CTGGCGGCCA CGATGTTCGC CGCGCTGGAG
TCGGAACTGC AACGTCCGGC GGGGGCCTGG CAGTCGGAAT GGCAGACGCT GTCGCAACTG
TTGCGCTGCT GCGGCGGTGC GAGTTCGCGC GCTTCGTCGC TGCTCAGCGG CCTGCGCGTC
GACACCGGCC GGATGCGCTC CCATCTGGAC GCGACCGGTG GCCTGCTGCG GGCCGGAGCA
GTTGCCGACC AGCTGGCCCC GGCTCTCGGC CGCCGCGAGG CTCACGAGCT CATCGCCGAT
CTGGCCGCCC GAGCCGAGAC AGCCACGTTC GACGGCCAGT CAAGCGCAGC GGACCACAAG
CCGCCTGGGT GGGCCCAGCT CGGTGACCAG TCCGAGCGCC CCGACCAGCC AAGCGCACCC
CACGGCCCTC CGGGCGCGGG CCAAGCCACC TTCCGCGAGT TCCTCGACGC CGACCCGACC
GTCACCGCCC ACCTCACGGC GGCCGAGCTG GACGCCGCCT GCGATCCGAC CGCCTGCCTT
CCCGCCGCGC GGGCCCTCGT CGATCGGGCC CTCGCACGAC ATCGAGCCCA GGAGGAGCCA
TGA
 
Protein sequence
MRPSSSPSEW GEPSIAPPVD ASDPFAVVFG DPRVDQACGT DGWLGAMLDA ERALAEALAE 
AELVPVAAAK AIGEACRSGG VTSAVFAHAS SASPVVPLVN TLAEAVPLEV RGWVHYGATS
QDIMDTAMML VAHRATAVIV DNLAHAAEAA ASLTERHRDT LLIGRTLGQH AAPTTFGAVA
AGWLSGIDAA RDQLRSARFE LAAQLGGPVG TLEPYGTQGL RVLADFAHRL GLADPGLPWH
TERTRVTRLA SALATGAGTL AKVAHDVSVL GSSDVGELRE GSGGGSSAMP HKHNPADSVL
VLANVRRTPG LAATMFAALE SELQRPAGAW QSEWQTLSQL LRCCGGASSR ASSLLSGLRV
DTGRMRSHLD ATGGLLRAGA VADQLAPALG RREAHELIAD LAARAETATF DGQSSAADHK
PPGWAQLGDQ SERPDQPSAP HGPPGAGQAT FREFLDADPT VTAHLTAAEL DAACDPTACL
PAARALVDRA LARHRAQEEP