Gene Snas_2233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2233 
Symbol 
ID8883427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2367785 
End bp2369008 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003511016 
Protein GI291299738 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00963796 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGTGTTC CCGAGAAGCT GAGCAACCCG CAGGCCCGCC GCATCGCGCT GGCGGCGCAG 
GGCTTCCACG CCCCCCGACC CTCCGGCAAA CGCGACGCCC GGCACCTGCG CAAGGTTCTC
TCCCACACCC AGCTGCTGCA GATCGACTCG ATCTACGTCC TGGAACGCGC CCACTACGTG
CCGGTGTTCT CCCGGCTCGG CGCCTACCCG CACGCGCTGG TCGACAAGGC CGCCTACCAC
GGACGCAAGC GCTCCCTGTT CGAATACTGG GGGCACGCCG CGTCGCTGCT GCCGGTCGAG
CTGTTCCCGT TGCTGCGTTG GCGGATGGAC GCCGCCGAGG AACACGCCTG GGGCGGGATG
GTGCGCATCG CCCGCGACAA CCCCGGCCTG GTGGACCGGC TGTACGAGGA GGTCCGGGCC
CGCGGCCCGG TCTCGGCCCG GGAACTGGAG GAGGAGGCGC CCCGGACCCG CGACCAATGG
GGCTGGAACT GGAGCGACAC CAAGAGCGCG TTGGAGTGGC TGTTCCGGTG CGGCCGGGTC
AGCGTCGCCG CCCGGCCCTC GTTCGAGCGC TACTACGACA TCACCGAACG GGTCATCCCC
GCCGAGGTGC TCAACACCCC GGCGCCCGAC CGCGCCGAAG CCCACCGGCA GCTCATGGCC
AAGTCGGCAG CCTCGCTGGG CGTGGCCACC GAGGTGGAAC TGCGCGACTA CTTCCGGCTG
CCGGTCGCCG ACGCCCGCGC CGCGCTGCGC GACCTCGTCG AGGACGGCAC CGTGCACCAG
GTGATCGTCG AGGGCTCGGA CAAACCGGCC TACCTGCACC GCGACGCCCG CGCCCCGCGC
CGCGTCAGGG CCCGGGCGCT GCTGAGCCCC TTCGACCCGC TGGTGTGGCA CCGCGACCGC
ACCCTGCGGC TGTGGGACTT CTTCTACCGC ATCGAGATCT ACGTGCCCGA GGCCAAACGC
GTGCACGGCT ACTACGTGCT GCCGTTCCTG CTGGGGGAGC ACCTGGTGGC CCGCGTCGAC
CTCAAGGCCG ACCGGGCGGC GGGCGTCCTG CGGGTGCCCG CGGCCTGGCG GGAGGAACAC
GTCGACGGCG ACACCGAACT GGTCGCGGGT GAGCTGGCCG CCGAGCTGCG GGAACTGGCC
GACTGGCTGG GACTGGCCGA GATCGCGCCG CCGGTCAAGG GCGATCTGGC CGCCGCCCTG
ACGTCGGCGC TGCGCTCGGC TTAG
 
Protein sequence
MSVPEKLSNP QARRIALAAQ GFHAPRPSGK RDARHLRKVL SHTQLLQIDS IYVLERAHYV 
PVFSRLGAYP HALVDKAAYH GRKRSLFEYW GHAASLLPVE LFPLLRWRMD AAEEHAWGGM
VRIARDNPGL VDRLYEEVRA RGPVSARELE EEAPRTRDQW GWNWSDTKSA LEWLFRCGRV
SVAARPSFER YYDITERVIP AEVLNTPAPD RAEAHRQLMA KSAASLGVAT EVELRDYFRL
PVADARAALR DLVEDGTVHQ VIVEGSDKPA YLHRDARAPR RVRARALLSP FDPLVWHRDR
TLRLWDFFYR IEIYVPEAKR VHGYYVLPFL LGEHLVARVD LKADRAAGVL RVPAAWREEH
VDGDTELVAG ELAAELRELA DWLGLAEIAP PVKGDLAAAL TSALRSA