Gene Snas_2203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2203 
Symbol 
ID8883396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2342239 
End bp2343405 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content65% 
IMG OID 
Productradical SAM enzyme, Cfr family 
Protein accessionYP_003510987 
Protein GI291299709 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00426672 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.359249 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGC CTGTATTGAC TTTGACGCCG CCGCGGGCTA CGCGGTCCCT GCCGCCGCGC 
CACTTCGCCG ACCTCACCAT GGAGGAGCGG CGTGAGGCGG TCCGTGAGCT GGACGAGCCG
GCCTTCCGGG CCAACCAGCT GTCCCGGCAG TACTACACCC GGCACGAGAC CAGCGTGTCC
CGGATGACGG ACCTGCCGGT GGCGTCGCGC GACAAGATCG CCGAAGCGCT GTTCCCCGCG
CTGCTGACGC CCATAAAGGA CACCGAATGC GACGACGGTA CCACCCGCAA GACGCTGTAC
CGGCTGCATG ACGGCTCGCT GGTCGAGAGT GTCCTCATGG GATACCCGGA TCGGGCGACG
GTGTGTGTTT CTTCACAAGC GGGCTGCGGC ATGGCCTGTC CCTTCTGCGC GACGGGCCAG
GCGGGCCTGA CGCGTAACAT GTCGACCGCC GAAATCGTTG AACAGGTTGT CAACGCCGCA
CGGCTCGCTG AGCAGGCCAA ACTCGGCCGG TTGTCTCATG TCGTGTTCAT GGGAATGGGG
GAACCTCTGG CCAACTACTC GCGGGTGGTG GCCGCGCTAC GTCGGGTCAC CGACCCGACT
CCGGGTGGAC TGGGCCTTTC GGCCCGGCAC ATCACGGTGT CAACCGTCGG ATTGGTTCCG
GCCATTCGGA GGTTGACGGA TGAGGATATG TCGGTGACGC TTGCTGTATC GCTGCACGCT
CCGGACGATG AGCTGCGGGA CGAGCTCGTG CCAGTAAACA GCCGATGGAA GGTCGCCGAA
GTGTTGGACG CCGCATGGAA CTATGCGAGG CGTACTGGGC GACGTGTCTC CATCGAATAC
GCGATGATCC GGGATGTGAA CGACCAGCCC TGGCGGGCTG ATCTGCTTGG GCGCCTTCTC
AAGGGGAAAC TCGCCCACGT TAACCTCATC CCCCTGAACC CCACTCCCGG CAGCAAATGG
GACGCCAGCC CCAAGCCGGT GGAACGTGAG TTCGTGGCAC GGTTGAGAGC AGCGGGCGTA
CCAACGACGG TGCGAGACAC CCGGGGCCGT GACATCGATG GCGCCTGTGG CCAGCTGGCC
GCGTCACAAC AGGACGTCGC GCAAGGCAGC GGGACTAAGA ACACGGCCCA CGATCAAAGG
GGCGAATCGC GGAAGGTGGC TTTGTAG
 
Protein sequence
MTTPVLTLTP PRATRSLPPR HFADLTMEER REAVRELDEP AFRANQLSRQ YYTRHETSVS 
RMTDLPVASR DKIAEALFPA LLTPIKDTEC DDGTTRKTLY RLHDGSLVES VLMGYPDRAT
VCVSSQAGCG MACPFCATGQ AGLTRNMSTA EIVEQVVNAA RLAEQAKLGR LSHVVFMGMG
EPLANYSRVV AALRRVTDPT PGGLGLSARH ITVSTVGLVP AIRRLTDEDM SVTLAVSLHA
PDDELRDELV PVNSRWKVAE VLDAAWNYAR RTGRRVSIEY AMIRDVNDQP WRADLLGRLL
KGKLAHVNLI PLNPTPGSKW DASPKPVERE FVARLRAAGV PTTVRDTRGR DIDGACGQLA
ASQQDVAQGS GTKNTAHDQR GESRKVAL