Gene Snas_2150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2150 
Symbol 
ID8883343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2280360 
End bp2282600 
Gene Length2241 bp 
Protein Length746 aa 
Translation table11 
GC content71% 
IMG OID 
ProductSuperfamily I DNA and RNA helicase-like protein 
Protein accessionYP_003510937 
Protein GI291299659 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.491919 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCAAATC GGGTGGATGC GACGCGAGCC GAGACTCTCG CCGAGGAGCA GCGGCACCTG 
GACGAGGTCT ACGGACGGCT CGACGCGCTG CGGGAACGGG CCGAGACGCG GCGGGCGGAG
GTGCTGTTGC AGTCGGAGGA CACTCCGGTG GCACAGCGGT TCCGGGAGTC CGTCGCTACC
AAGTACACAC AGGACATGGT GAAGCTCACG GCGGTGGAGA ACGACCTGTG TTTCGGGCGG
CTCGACCTGA CCGACGGCGA GGTGCGCCAC ATCGGCAGGA TCGGGATCCT GGACGCCGAG
CACAATCCGC TGCTCATCGA CTGGCGGGCC GAGGCGGCGC GGCAGTTCTA TCTGGCGACC
GCCGCCCGTC CCGGTGACGT GCGGCGCAGG CGCCACATCA ACACCAGGCA GCGCAAGGTG
ACCGGCGTTA CCGACGAGGT GCTGGACCTG GGGGCGCCCC GGGATTCCTG GCACGAGGAG
CTGACCGGGG AGGCCGCGCT CATGGCCGCC CTGGACGCCG AGCGCACCGG CAAGATGCGC
GACATCGTGG CCACGATCCA GTCCGAACAG GACGCCATCA TCCGGTCCGA ACTGGACGGG
ATCCTGGTGG TGGCGGGCGG TCCGGGCACC GGCAAGACCG CCGTCGCGCT GCACCGGGCC
GCGTACCTGC TGTACGAACA CGCCGAGAAA CTCGCGGGCC GGGGGGTGCT GCTCATCGGC
CCGAACTCGA CGTTCCTGGG CTACATCGGC GACGTGCTGC CGGGACTGGC CGAGACCGAC
GTCCTGCTGC GTACGATGTC CACTCTGTAC CCGGGTGTCG AGGCGACCCG GGAGGAGGAT
CCCGGGGTCG CGGCCGTCAA GGGCGACATC GCGATGGTCG ACGTCATCGC CGCGGCTGTC
GCCGACCGGC AGCAGCTGCC CAAGACCGTC GTCGACGCCG AGACCGAGTA CGGCAAACTC
GTCCTGGACC GACAGACCTG CGAGCGGGCC CGCGCCAAGG CCCGCGCCAG CGGCAAGCGG
CACAACCAGG CCCGCGAGGT ACTGCGGGAG GCCGTCCTGG ACGCGTTCAC CGAGGCCGCC
GCCCAGCGAG TCGGCGCCGA CCCCCTGGGT GGCGACAACC TGTTGTCGGA AGCCGATCTG
GCCGAGATCC GCCGCGAACT GTCCGGTGAG TCGGAGGTCC TGGCCGTCAT GGACTGGCTG
TGGCCCAACC TGACCCCGCA GCAGCTGCTG GCGGGCCTGT TCGGTTCCTC CAAACGCATG
GCCGTCGCGA TGCCGCACCT GAACGCTGAA CAGCGCGCCC GGCTGGCCCG CGGCCCACAC
AGCGGCTGGG CCGCCTCGGA CGTGCCGCTG CTGGACGAGG CCGCCGAACT GCTCGGCGAC
CTGGACGACT CCGAGGCGCG CGCCCGCCGG GCCCGTCGCG ACAGCGCCCG CGCCGCCTAC
GCGCAGGGCG TGCTCGACAT CGTGTTCGGT TCCCGCTCCA TCGACCTGGA GGACGAGGCC
GACCCCGACG CCGACCTCAT CATGGCCACC GACGTCATCG ACAAGACCCT GCTGGGCGAA
CGGCACGCCG AGGACGAGTA TCTGTCCACA GCCGAGCGTG CCGCCGCCGA TCGGGAATGG
ACCTTCGGGC ACATCGTCGT GGACGAGGCC CAGGAACTGT CGGCGATGGC CTGGCGGATG
ATCATGCGCC GCAGCCCCAG CCGCTCCATG ACCATCGTCG GCGACCTCGC CCAGGCCGGG
GAGGAAGCCG GTGCGGCGTC CTGGAACCAG ATCCTGGAAC CCTACGTGCG GCGCTGGCGG
CTGGAGGAAC TGTCGGTCGG CTACCGCACC CCGGCCGAGA TCATGGAACG CGCCGCCGTC
GAACTGGCCC ACATCGACCC CGACGCCCGG GTCCCCCGGG CGGTGCGCGC CACCGGTGTC
CCGCCGTGGG AGGAGACCGT CGCCGACGTC GACCTCGACG TCGCGCTGCG CAAACGCGTC
GGCGCCGAAC TGGACGGCCT CGACAGCGGA CGCCTGGGCG TCATCGGTCC CCGCCAGCGC
ATCGGCGAGA TCAACGACGC CATCGGCAGC CCCGAGTCGG TCACGGTCCT CGCGGTCCGC
GACGCCAAGG GACTGGAGTT CGACGCCGTC ATCGTCGTCG ACCCCGACGC CATCGTCGCC
GAATCGGGCC GGGGTCACAG CGACCTGTAC GTCGCCCTGA CCCGCGCCAC CCAGCGACTG
GGCATCCTGC GGATCACCTG A
 
Protein sequence
MSNRVDATRA ETLAEEQRHL DEVYGRLDAL RERAETRRAE VLLQSEDTPV AQRFRESVAT 
KYTQDMVKLT AVENDLCFGR LDLTDGEVRH IGRIGILDAE HNPLLIDWRA EAARQFYLAT
AARPGDVRRR RHINTRQRKV TGVTDEVLDL GAPRDSWHEE LTGEAALMAA LDAERTGKMR
DIVATIQSEQ DAIIRSELDG ILVVAGGPGT GKTAVALHRA AYLLYEHAEK LAGRGVLLIG
PNSTFLGYIG DVLPGLAETD VLLRTMSTLY PGVEATREED PGVAAVKGDI AMVDVIAAAV
ADRQQLPKTV VDAETEYGKL VLDRQTCERA RAKARASGKR HNQAREVLRE AVLDAFTEAA
AQRVGADPLG GDNLLSEADL AEIRRELSGE SEVLAVMDWL WPNLTPQQLL AGLFGSSKRM
AVAMPHLNAE QRARLARGPH SGWAASDVPL LDEAAELLGD LDDSEARARR ARRDSARAAY
AQGVLDIVFG SRSIDLEDEA DPDADLIMAT DVIDKTLLGE RHAEDEYLST AERAAADREW
TFGHIVVDEA QELSAMAWRM IMRRSPSRSM TIVGDLAQAG EEAGAASWNQ ILEPYVRRWR
LEELSVGYRT PAEIMERAAV ELAHIDPDAR VPRAVRATGV PPWEETVADV DLDVALRKRV
GAELDGLDSG RLGVIGPRQR IGEINDAIGS PESVTVLAVR DAKGLEFDAV IVVDPDAIVA
ESGRGHSDLY VALTRATQRL GILRIT