Gene Snas_2058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2058 
Symbol 
ID8883251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2176779 
End bp2178164 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content66% 
IMG OID 
Productglycyl-tRNA synthetase 
Protein accessionYP_003510845 
Protein GI291299567 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.587105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.324563 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTATCG ACAACATCGA CGCACTCATC AGTCTCAGCA AACGCCGCGG ATTCGTATAC 
CCGTCGAGCG AGATCTACGG CGGTACCCGT TCGGCCTGGG ACTACGGTCC GCTGGGGGTG
GAGCTCAAGG AGAACATCCG CCGCCAGTGG TGGAAGGCCA TGGTGCAGCA GCGGGACGAC
GTCGTCGGTA TCGACTCGGC CGTGGTGCTG AACCGGCAGG TGTGGGAGGC CACCGGCCAC
GTCCGTGAGT TCACCGACCT GCTGACCGAG TGTCAGTCCT GCCACAAGCG GTTCCGTGCC
GACCACCTGC TGGAGGCCTA CGCCGCCAAG CACGACGGCG CCGAGCCCGC CGACGGCGTC
CGCTCGCTGG TGTGCGCCAA CTGCGGCACC CGGGGCGCGT TCACCGAGCC GCGCATGTTC
AACACCATGA TGAAGACCTT CCTCGGCCCC ATCGAGAGCG AGGACAACGC CCACTTCCTG
CGGCCCGAGA CCGCGCAGGG CATCTTCGTC AACTTCGCCA ACGTGATGAC CTCGGCGCGC
AAGAAGCCGC CGTTCGGCAT CGCGCAGGTC GGCAAGTCGT TCCGCAACGA GATCACGCCG
GGAAACTTCA TCTTCCGCAC CCGCGAGTTC GAGCAGATGG AGATGGAGTT CTTCGTCGAG
CCCGGCTCGG ACGAGGAATG GCACGAGTTC TGGCTCAACG AGCGCTGGAA CTGGTACACC
GACCTGGGCA TCAGCGAGGA GAACATCCGC CGCTACGAGC ACCCGAAGGA CAAGCTCGCC
CACTACGCCA AGCGCACAGT GGACATCGAG TACCGCTTCG GCTTCGGCGG CAAGGAGTTC
GACGAACTCG AGGGCATCGC CAACCGGACC GACTTCGACC TGTCGTGCCA CACCACGGCC
TCCGGCGTCG ACCTGTCCTA CTTCGACCAG GCCAAGGGCG AGCGGTGGAC GCCGTACGTC
ATCGAACCGG CCGCCGGTCT GACCCGCTCG GTGCTGGCCT TCCTGATGGA GGCCTACGAC
GTCGACGAGG CCCCCAACAC CAAGGGCGGC ATCGACAAGC GCACCGTGCT GCGCTTCGAC
CCCCGGCTGG CGCCGGTCAA GGTCGCGGTG CTCCCGCTGT CGCGCAACGA GAAGCTGTCG
CCCAAGGCGC GCGACCTTGC CAAGGACCTG CGCAAGCGCT GGGTGGTCGA CTTCGACGAC
GCGGGTGCCA TCGGCCGCCG CTACCGTCGC GCCGACGAGA TCGGCACCCC GCTGTGCGTC
ACCGTCGACT TCGACACTTT GGACGATGAC GCGGTGACCG TGCGGGACCG CGACACCATG
AAGCAGGAGC GGGTGGCGCT GTCGCAGGTC GAGTCCTACC TGATCGAGCG ACTGCCGGGC
TGCTAG
 
Protein sequence
MSIDNIDALI SLSKRRGFVY PSSEIYGGTR SAWDYGPLGV ELKENIRRQW WKAMVQQRDD 
VVGIDSAVVL NRQVWEATGH VREFTDLLTE CQSCHKRFRA DHLLEAYAAK HDGAEPADGV
RSLVCANCGT RGAFTEPRMF NTMMKTFLGP IESEDNAHFL RPETAQGIFV NFANVMTSAR
KKPPFGIAQV GKSFRNEITP GNFIFRTREF EQMEMEFFVE PGSDEEWHEF WLNERWNWYT
DLGISEENIR RYEHPKDKLA HYAKRTVDIE YRFGFGGKEF DELEGIANRT DFDLSCHTTA
SGVDLSYFDQ AKGERWTPYV IEPAAGLTRS VLAFLMEAYD VDEAPNTKGG IDKRTVLRFD
PRLAPVKVAV LPLSRNEKLS PKARDLAKDL RKRWVVDFDD AGAIGRRYRR ADEIGTPLCV
TVDFDTLDDD AVTVRDRDTM KQERVALSQV ESYLIERLPG C