Gene Snas_2030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2030 
Symbol 
ID8883223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2150624 
End bp2151550 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510818 
Protein GI291299540 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0852704 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCATCGC ATCCCGATTC CCGCACGCCG GTCGCGCGCG GCCTTCTCTT CCTGTCCATC 
GCCGGTGTCG CCTGGGGCAC CACCGGTGCC GCCGTCGACC TGATCTTCGG CTCATCCGAC
CTGGGCCCGC TGGCCATGTC GTTCTGGCGC TACGTCGGGG GTTTCCTCGT CCTGCTGGCC
GTCCTGGCGG TGCGCCGGGC GCTCGGCCGC CGTCCCCGGG CCGGTAGCGG ACGGCCGGGC
CCCCGCATCT TCACCGGCCT GGCGCTGGCG GTGTTCCAGA CCGCCTACTT CGTCGCGGTC
GCCGAGACCG GCGTCGCCGT GGCCACCGTC GTCACCCTGG GCGCCGCCCC GGTCCTGACC
GCGATCGGCG GCCGGTTCCT GCTGAAGGAA CGGCTCGGCG GCGGCGGACT GCTCGCCGTG
GCCGGGGCGA TCGTTGGCCT GGCGGTGCTG GTGCTCGGCA ACGACGCCAC CACCGTCCGT
CCACTGGGGG TGGTCTTCGC GCTGGCGTCG GCCGCGGCGT TCGCGGCCTG CAACGTGCTG
GCCCGCCGCC ACGGCGACGA CCAGGACCCG TACACCATGA CGGTGTGGGC CTTCGGCATC
GGCGCGGTCG CCATGTTCCC GTTCGCGCTG GCCGAGGGCA TGATCCCGAC CATGACCGAC
CCTGTCCTGG TGTTCGCTCT GCTGGTCTAC GTGGCGGTGG TGCCCACCGG CATGGCCTAC
CCGCTGTACT TCACCGGCGC GGGAGCGGTG CGCGCGGCCA CCGGCTCGAT CGTGATGCTG
ATCGAACCGG TCGCGGCGGC CGTCCTGGCC ATCACCCTGC TGGGCGAACC GCTGACCCTG
GCGACCTCGC TGGGAACGGT GGTGCTGCTG GCCTCGGTGG CCGGTCTGGC CCGCGCCGAG
ACCGTCCGCA CCCCGGCCCC CGCCTGA
 
Protein sequence
MSSHPDSRTP VARGLLFLSI AGVAWGTTGA AVDLIFGSSD LGPLAMSFWR YVGGFLVLLA 
VLAVRRALGR RPRAGSGRPG PRIFTGLALA VFQTAYFVAV AETGVAVATV VTLGAAPVLT
AIGGRFLLKE RLGGGGLLAV AGAIVGLAVL VLGNDATTVR PLGVVFALAS AAAFAACNVL
ARRHGDDQDP YTMTVWAFGI GAVAMFPFAL AEGMIPTMTD PVLVFALLVY VAVVPTGMAY
PLYFTGAGAV RAATGSIVML IEPVAAAVLA ITLLGEPLTL ATSLGTVVLL ASVAGLARAE
TVRTPAPA