Gene Snas_1918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1918 
Symbol 
ID8883110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2033988 
End bp2034755 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content68% 
IMG OID 
ProductMIP family channel protein 
Protein accessionYP_003510707 
Protein GI291299429 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.157288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACT ATATTGCCGA GGTCATCGGC ACCATGATCC TGATCCTGCT GGGGAACGGG 
GTCGTGGCTG GGGTCGTGCT CACCAAGTCC AAGGCCAAGG ACGCCGGCTG GGTCGTCATC
ACCTTCGCCT GGGGTCTGGC GGTCGCCATG GCGGTCTACG CCGTGGGCCG CATCAGCGGC
GCGCACCTCA ACCCCGCGGT CACGATCGCC ATGGCGGCCG GTGGCGACGC GAAGTTCGGA
TGGGAACTGG TGCCCGGCTA CATCGCCGCG CAGATGATCG GCGCGATCAT CGGCCAGACC
CTGGTGTTCC TGGCCTACTA CAAGCACTGG GGCGCCACCG ACGACGCGGG CGCGAAGCTC
GCCGCGCACA GCACCTCACC AGCCATCCCC AGCAAGGTCT GGAACTCCGT CACCGAGGTC
ATCGGCACCT TCATGCTGGT CTTCGGCATC CTGGCCATCG GCGCCAACGG CAAGGCGCTG
GGAAGCAACG TCGACCTCCA GACCGCCTTC GGCACCGGCT TCGCGCCGCT GCTGGTCGGT
CTGCTGGTGG TCGTCATCGG CATGTCCCTG GGCGGCCCCA CCGGCTACGC CATCAACCCC
GCCCGCGACC TCGGCCCCCG TATCGCCCAC CAGATCCTGC CCATCGCGGG CAAGGGAAGT
TCGGAGTGGT CGTACGCCTG GGTGCCGGTG GCCGCCCCGA TCGTCGGCGG TCTGCTCGCC
ACCGGGCTGT GGACGCTGCT GGGCAACCTC AAGGAATTCA CTCCGTAA
 
Protein sequence
MSDYIAEVIG TMILILLGNG VVAGVVLTKS KAKDAGWVVI TFAWGLAVAM AVYAVGRISG 
AHLNPAVTIA MAAGGDAKFG WELVPGYIAA QMIGAIIGQT LVFLAYYKHW GATDDAGAKL
AAHSTSPAIP SKVWNSVTEV IGTFMLVFGI LAIGANGKAL GSNVDLQTAF GTGFAPLLVG
LLVVVIGMSL GGPTGYAINP ARDLGPRIAH QILPIAGKGS SEWSYAWVPV AAPIVGGLLA
TGLWTLLGNL KEFTP