Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1918 |
Symbol | |
ID | 8883110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 2033988 |
End bp | 2034755 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | MIP family channel protein |
Protein accession | YP_003510707 |
Protein GI | 291299429 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.157288 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACT ATATTGCCGA GGTCATCGGC ACCATGATCC TGATCCTGCT GGGGAACGGG GTCGTGGCTG GGGTCGTGCT CACCAAGTCC AAGGCCAAGG ACGCCGGCTG GGTCGTCATC ACCTTCGCCT GGGGTCTGGC GGTCGCCATG GCGGTCTACG CCGTGGGCCG CATCAGCGGC GCGCACCTCA ACCCCGCGGT CACGATCGCC ATGGCGGCCG GTGGCGACGC GAAGTTCGGA TGGGAACTGG TGCCCGGCTA CATCGCCGCG CAGATGATCG GCGCGATCAT CGGCCAGACC CTGGTGTTCC TGGCCTACTA CAAGCACTGG GGCGCCACCG ACGACGCGGG CGCGAAGCTC GCCGCGCACA GCACCTCACC AGCCATCCCC AGCAAGGTCT GGAACTCCGT CACCGAGGTC ATCGGCACCT TCATGCTGGT CTTCGGCATC CTGGCCATCG GCGCCAACGG CAAGGCGCTG GGAAGCAACG TCGACCTCCA GACCGCCTTC GGCACCGGCT TCGCGCCGCT GCTGGTCGGT CTGCTGGTGG TCGTCATCGG CATGTCCCTG GGCGGCCCCA CCGGCTACGC CATCAACCCC GCCCGCGACC TCGGCCCCCG TATCGCCCAC CAGATCCTGC CCATCGCGGG CAAGGGAAGT TCGGAGTGGT CGTACGCCTG GGTGCCGGTG GCCGCCCCGA TCGTCGGCGG TCTGCTCGCC ACCGGGCTGT GGACGCTGCT GGGCAACCTC AAGGAATTCA CTCCGTAA
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Protein sequence | MSDYIAEVIG TMILILLGNG VVAGVVLTKS KAKDAGWVVI TFAWGLAVAM AVYAVGRISG AHLNPAVTIA MAAGGDAKFG WELVPGYIAA QMIGAIIGQT LVFLAYYKHW GATDDAGAKL AAHSTSPAIP SKVWNSVTEV IGTFMLVFGI LAIGANGKAL GSNVDLQTAF GTGFAPLLVG LLVVVIGMSL GGPTGYAINP ARDLGPRIAH QILPIAGKGS SEWSYAWVPV AAPIVGGLLA TGLWTLLGNL KEFTP
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