Gene Snas_1913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1913 
Symbol 
ID8883105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2028580 
End bp2029251 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content69% 
IMG OID 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003510702 
Protein GI291299424 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTCG CCGACCTCGA ACCGATCGAC CGGGAGTCGA CGGCGGGCAT CATCGCCCGC 
CGACTGCGAC AGGCGATCAT GGACGGCTCC ATGCCACCGG GAACCCAGCT CGGCGAGACC
GAGCTGGCCG GACGCTTCAA CGTCTCGCGC GGACCACTGC GCGAGGCGAT GCAGCGCTTG
GTGTCCGAGG GCCTGTTGCG CAGCGAACGG CACCGCGGCC TGTTCGTCAT CGACCTCGAA
CCCGGCGACG TCCGCGACGT CTACACCGCG CGCTGGGCGA TCGAACGCGC CGCCGTCATC
GAGATCATGG CGGGCGACCG CGAGGCCACC GCCGCGCTGC TCGACGAGAC GGTCGCGGCC
ATGGCCATGG CCGCCGACCA CAACAACCCG ACGGCACTGT CCGACGCGGA CCTGCGCTTC
CACGAGGTCC TCATCGGAGC CTCGGGATGC AAACGGCTGG TTCGAATGGC ACGCACCCTG
CTCATCGAGA CCCGGATGTG CCTGACGCTG TTGCAGACCA CCTACCGGCG CGTGGACGAA
CGCGTCGACG AGCACAACCA GATCATCAAG GCCATCCGGC GCGGCGACAC CCCCACCGTG
CTGAAACTGC TGGAGAACCA CATGGAGGAC GCCGTCCAGC GCCTGGCGCC GGGTACCACC
CTGCACCCCT GA
 
Protein sequence
MTFADLEPID RESTAGIIAR RLRQAIMDGS MPPGTQLGET ELAGRFNVSR GPLREAMQRL 
VSEGLLRSER HRGLFVIDLE PGDVRDVYTA RWAIERAAVI EIMAGDREAT AALLDETVAA
MAMAADHNNP TALSDADLRF HEVLIGASGC KRLVRMARTL LIETRMCLTL LQTTYRRVDE
RVDEHNQIIK AIRRGDTPTV LKLLENHMED AVQRLAPGTT LHP