Gene Snas_1903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1903 
Symbol 
ID8883095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2019709 
End bp2020386 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content71% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003510692 
Protein GI291299414 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.202425 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.182857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAC CCATCCGCGT CCTGGTCGCC GACGACCACC TCGTGGTGCG CACCGGCTTC 
GCCGAACTGC TTGGCACCCA ACCGGACTTC AGCGTCGTCG GCATCGCCTC CGACGGCGCC
GAGGCCGTGA TGGCCTGCCG CACCGCCACC CCCGACGTCG TCCTCATGGA CGTCCGGATG
CCCAACATGG ACGGCATCGA GGCCACCCGC CGCATCGCCG CCACCTCCGA GGCGACGCCG
CGCGTCATCA TCCTGACCAC TTTCGACCTG GACGAGTACG TCTACGACGC GCTGCGAGCC
GGGGCCAGCG GCTTCCTGCT CAAGGACGTC ACCGCCGAGC GGCTGTTCGA CGCCGTACGG
GTCGTGGCGG CGGGGGAGGC GCTGCTGGCG CCCACCGTCA CCCGCCGCCT CATCGGCGAG
TTCGTCCAGT CCAAGCAGCC GCGCCCGGTC GCCGACGCGA GGCTGGCGTC GCTGACGCCG
CGCGAGACCG AGGTGCTGCG GCTGGTCGCC GAAGGACTGT CCAATCCGGA ACTGGCCGCC
CGGCTGACCG TCTCGGAGGA GACGGTTAAG ACCCACGTCA GCCGGGTACT GCACAAACTC
GGGCTGCGCG ACCGCACCCA GGCGGTGGTG GCCGCCTACG AATCCGGCCT CGTCGTCCCC
GGCGGCCGTC CGGCCTAG
 
Protein sequence
MSQPIRVLVA DDHLVVRTGF AELLGTQPDF SVVGIASDGA EAVMACRTAT PDVVLMDVRM 
PNMDGIEATR RIAATSEATP RVIILTTFDL DEYVYDALRA GASGFLLKDV TAERLFDAVR
VVAAGEALLA PTVTRRLIGE FVQSKQPRPV ADARLASLTP RETEVLRLVA EGLSNPELAA
RLTVSEETVK THVSRVLHKL GLRDRTQAVV AAYESGLVVP GGRPA