| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1900 |
|---|
| Symbol | |
|---|
| ID | 8883092 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 2015742 |
|---|
| End bp | 2017256 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003510689 |
|---|
| Protein GI | 291299411 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0528132 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGAT ACCGCTCCCC GCTGCCCAAG GGCCGAGACG GCTTCGGGCA ACTCGTCCGC
GCCGAGTGGA CCAAACTGCG CAGCGTGTAC GGCTGGATCG CGGGCCTGGC GATGATGGCC
GTGACCATTG TGGGCCTGGG GACGTTCATC GCCTGGGGCA GCACCTCCTC GTGCATGGAG
GGCAACAAGG AGGTCACGTG CCCGAAGCCG CCGCTGGGTC CCGAGGGCGA CGCGGTGACC
GACAAGTTCT ACTTCGTCAA CCAGCCGCTG ACCGGGGACG GCGACATCAC CGTCCGGGTC
ACCGAGATGT CCGACAACAT CGACTCCGGC ACGGCGCCCT GGGCCAAGGC CGGGATCATG
ATCAAGGAGA ACCTGAAGCA GGGCTCGTCC TACGCCGCGG TCATGGCCAC CGCCGACCAC
GGCGTGCGGA TGCAGCACGA CTACAAGTAC GACACCGCGG GGAAACCCGG CCGCCCGTCC
CCGGACGAAC CTCGGTGGCT GCGGCTGGAT CGCGACGGCG ACACCATCAC CGGCTCCGAA
TCCCGCGACG GAAAAACCTG GACCACAGTG GATAAGGTGC GGCTGGCAGG ACTGCCCGAA
ACCGTCCACA TCGGCATGTT CGCCGCCTCG CCCGGTTCGC TCAACATCGG ACCCGCCCAG
TTCGGCGGTT CCGTTCAGTC CGGACAGATG GCCCCTGCGA CCGGCGTGTT CGACGAGGTC
ACCGCGCCGG GTGACGACTG GGACGCGGCC GACATCGGCG CCACCGAGGC GGCAGAAGGC
CCGCCGCACC TCACCAGCGG GCACACCGTC GACGACGGCG TGTTCACCGT CTCCGGCAGC
GGTGACATCG CCCCGTACAC CGAAGGACAC CACCCCGAGG CCACCCTCCC GGGTGTCTGG
ATCGGACTGA TCGCCCTGGT GGTGGTCGCC GTCGGGTTCG TGACCGTGGA ATACCGGCGC
GGCATGATCC GCACCTCGCT GCTGGCCAGT CCCCGCCGAG GCCGCGTGCT GCTGGCCAAG
GCGACGGTGC TGGGTTCGGT CACCTTCGTG CTGGCGCTCG TCGCCATCGC GTTCACCGTC
ACGGTTGGAA AGCCGCTGCT GCGCGGTGGC GGCAACTTCA TCCTGCCGGT GCCGGTGAGC
ACCGAGATCC GGGTCATTGT CGGCACCGCC GCGGTGTTGG CCCTGACCGC CGTCCTGTCG
CTGGCCATCG GTGCGCTGTT CCGGCGCGGC CTGACCGGCA CCGTCACCGC GATCACCGTG
ATGATCCTGC CGTTCCTGGT CACCTTCACC GCGGTGCTGC CGCACTCGGT TCCACAGTGG
CTGCTTCGGG TCACCCCGGC GGCGGGTTTC GCGATCACAC AGGGCATCCC TGAATACCCG
CACGTCTACG CGGACTACAG CCCGGCGAAC GGGTACTACC CGCTGCCGCC GTGGGCCGGG
CTGCTCGTCC TGACGGCCTT CGCCGCCGCG ACGCTGTGGC TGGCGGTCCG ACGACTGTCG
CGGAGGGACA CATGA
|
|---|
| Protein sequence | MTGYRSPLPK GRDGFGQLVR AEWTKLRSVY GWIAGLAMMA VTIVGLGTFI AWGSTSSCME
GNKEVTCPKP PLGPEGDAVT DKFYFVNQPL TGDGDITVRV TEMSDNIDSG TAPWAKAGIM
IKENLKQGSS YAAVMATADH GVRMQHDYKY DTAGKPGRPS PDEPRWLRLD RDGDTITGSE
SRDGKTWTTV DKVRLAGLPE TVHIGMFAAS PGSLNIGPAQ FGGSVQSGQM APATGVFDEV
TAPGDDWDAA DIGATEAAEG PPHLTSGHTV DDGVFTVSGS GDIAPYTEGH HPEATLPGVW
IGLIALVVVA VGFVTVEYRR GMIRTSLLAS PRRGRVLLAK ATVLGSVTFV LALVAIAFTV
TVGKPLLRGG GNFILPVPVS TEIRVIVGTA AVLALTAVLS LAIGALFRRG LTGTVTAITV
MILPFLVTFT AVLPHSVPQW LLRVTPAAGF AITQGIPEYP HVYADYSPAN GYYPLPPWAG
LLVLTAFAAA TLWLAVRRLS RRDT
|
|---|
| |