| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1873 |
|---|
| Symbol | |
|---|
| ID | 8883065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 1963721 |
|---|
| End bp | 1964218 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, AsnC family |
|---|
| Protein accession | YP_003510662 |
|---|
| Protein GI | 291299384 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0036157 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0140014 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCTGGAA TATCAAAGAA AAAACTCAAC AACACCTTCG GTGAACGCGA TGCCCTCCTG
GACCCCGTCA ATCTGCGCCT GCTGGCGGCC CTGCACGCGG ACCCCCGCAT CTCCATGACC
CAACTGGCCA AACAGGTCTC CATGTCCGCC CCGGCGGTCA CCGAACGCGT CCAGCGCATG
CAACGCACCG GCATCATCGT CGGCTTCCAC ATGGACGTCG ACCCCGCCGC CCTGGGCATG
CCCGTCACCG CCCTGGTCCG CATCAAACCC GGCCCCGCGC AACTCCCCAA ACTCATCGAA
GCCGTCCAGA AGATGCCCCA GGTAACCGAA TGCCACCGCA TCACCGGCGA GGACTGCCTG
TTCGTCAAGG TCCACGTCCC CTCCATCGCC CGCCTCGACG AAACCCTCGA CCAGTTCCTC
CTCTACGGAC AGACGACCAC CTCGATCATC CAGTCCACCC CCGTCCCACC CCGCCCCCTC
CCCGTCACCC ACGACTGA
|
|---|
| Protein sequence | MPGISKKKLN NTFGERDALL DPVNLRLLAA LHADPRISMT QLAKQVSMSA PAVTERVQRM
QRTGIIVGFH MDVDPAALGM PVTALVRIKP GPAQLPKLIE AVQKMPQVTE CHRITGEDCL
FVKVHVPSIA RLDETLDQFL LYGQTTTSII QSTPVPPRPL PVTHD
|
|---|
| |