| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1779 |
|---|
| Symbol | |
|---|
| ID | 8882969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 1864715 |
|---|
| End bp | 1865335 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_003510569 |
|---|
| Protein GI | 291299291 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.304494 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.74945 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGAGG ATTCCAGCAC CCCATCGGCG GAGCACCCCG AGAACTGGCC GCAGCGCCAG
CTCCGGGACG CGACCTCGCT GCGAGCGCTG GCCCACCCGC TGCGGCTGCG GTTGCTGGAA
CTGCTGGGAG TGCACGGTCC CGCCACCGCC ACCGAACTGG CCGAGCGCGT CGGCCACAGC
CCCGCCAACT GCTCCTGGCA CCTGCGGCAG CTGGCGGCGG GCGGATTCAT CGAGGAGGCC
GAAGGTGGCA CCGGACGACA GCGGATCTGG CGCTTCGTGC CCTCGGGAAG TTCCTACGGC
TACAGCGATG ACGCCCCCGA GGTCGCCGAG GCCGCCGCCA CCGCCAGCGC GATCCAGCTG
GAACACGAGG TCGACGAACT GCGCACCTGG CGCGCCACCC GCCACACCGA CTCCGACCGC
TGGCGCGACG TCGCCTTCAC CACCCAGTCG ATTCTGTGGC TCACCGCCGA CGAACTCGAG
GAACTCAGCG AGCAGGTCGC CGAGCTGTAC CTGCGGCAGG TGCGGCGCCA CTTCGAGCCC
GAGACCCGCC CGACAGGCTC CCGTCCGGTC CGTCTTATCG CCTGGGGCAT CCCCGCCAAG
AACCTCGAGA CCGAGGAATA G
|
|---|
| Protein sequence | MTEDSSTPSA EHPENWPQRQ LRDATSLRAL AHPLRLRLLE LLGVHGPATA TELAERVGHS
PANCSWHLRQ LAAGGFIEEA EGGTGRQRIW RFVPSGSSYG YSDDAPEVAE AAATASAIQL
EHEVDELRTW RATRHTDSDR WRDVAFTTQS ILWLTADELE ELSEQVAELY LRQVRRHFEP
ETRPTGSRPV RLIAWGIPAK NLETEE
|
|---|
| |