| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1757 |
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| Symbol | |
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| ID | 8882947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 1840632 |
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| End bp | 1843613 |
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| Gene Length | 2982 bp |
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| Protein Length | 993 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003510548 |
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| Protein GI | 291299270 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.790916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.333807 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGACA TGGCCCGACT TGGAACAGGA ATCCCGCTGG TAGCCCGCCG GGCGGAGATG
CGCATATTGA ACACGGCATT GGAACGCGCC AGGTCGAAGC GGCCTGGCGC GTTGCTGCTG
TCCGGAGACG CGGGCGTCGG CAAGTCCCGC GTCCTGTCGG AGCTGCTCGA CAAGGCCCGC
GAGGACGGCG ACCTGGTGTT CGTCGGACGC TGCCTCGACA CCGGCGAATC GGCGCTGCCC
TACCTGCCGT TCGCCGAGAT CAGCGACCAG ATCTTCGAGT ACGACCCCGA ACTCGTCACC
GGCAGCGACG CGCTGCTGCG CCTGATACCC GGCCGTGAAC CCGGCGACGG CGGTCGCGGC
GGCGAACGCG ACCTCGGCCA GCTGCGGCTG TTCGACGCGC TGCGTTCCGT GATCGACCGG
CTGGCCGCCG ACAAGACCGT GGTACTGGCC TTCGAGGACC TGCACTGGGC CGACCGCTCC
AGCCGGGAAC TGCTCAGCTT CCTGCTGGCC CGACTGACCC AGCAGCGGCT GCTCATCATC
GCCACCGTCC GCTCCGACGA CCTGCACCGC CGCCACCCGC TGCGGCCGCT GCTGGCCGAA
CTGGTGCGGC TGCCGCACGT CGACCGGCTG CACCTGGAGC CCTTCGCCGC CACCGACATC
GACGTGTTCG TCCGCTCGCT GTCCACCGTG GACGTGTCCG AGACCGTGAT GCGCGCGATC
GCCGAACGCA GCGAGGGCAA CGCCTTCCTG GCCGAGGAAC TGGTCTCGGC CGCCACCGCC
GACGTCCCCC GGGAACTGGC CGAGGTGCTG CTGGCCCGCG TCGAACGACT CTCGGCCCCG
GCACAGAAGG CGATCCGGTT GGCCTCGGTG ATGGGCCGCG ACTTCAAGCA CCGGCGACTG
TCCGCCGTCG CCGATCTGAC GCCCGACGAA CTCGACCTCG CGCTGCGCGA GGCCGTCGCC
CACAACGTCC TGACCATCGA CGAGGCCACC GAGTCCTACT CGTTCCGGCA CGCGCTGCTG
CACGAGGCCG TCTACCACGA CCTGCTGCCC GGTGAACGCT CCCGGCTGCA CGGCCGGGTC
GCCGAGGCGA TGAAGACCGA ACCCGGCGCC CGGGCCGCCG AACTGGCCCG CCACAGCATG
GAAAGCCACG ACCTGCCCAC CGCCCTGGCC GCGTCGGTCG CGGCGGCCGA ACAGGCCGAG
GAGATGGGAG CCCCCGCCGA GGTCCTCATC CACACCGAAC GCGCCCTGCA ACTGTGGAGC
GCCGTCGCCG AACCCGAGAA GGTCAGCGGC AGCGACGAAC TGGAACTGAT GGTGTGGTCG
GCGTGGGCCG CCGGAGCCTC GGGCGAACCC GACCGGGCCG TGGCCCACAG CCGCGCCGCC
ATCGACCTGG CCGACCGGCT CGGCGACGTC GTCCACGCGG CGGAGAAACG CCGTCGGCTC
GCGGAGTTCC AGCTGGGTCT GGACGGGCAA CAGGGCCAGG CCCTCGCCGT GGTGCGGGAA
GCCTGGGATT CGATCGCCGA CACCGCACCC AGCGCGGGTA AGGCCAGGCT GCACGCCACC
ATGGCCCGCG CCTACCGGGC CAACCGCTAC CGGGACAAGG CCGCCGAACT GGCCGCGGCC
GCCATCGAGA CCGCCCAGGC CGCCGCCGCG CTGTCCGACG GCACCGACGA CAAGGAGCGG
TGTCGACTGC TGGCCGCCGA GGCCGACGCG CGCGTCACCC GGGTCATGGC CGCGGACCGC
GACACCCACG ACGTCGACAC CGTCGTCGAG CGGATCAACG AGGCGGCGGA GCTGGCCCGC
AGGGCCGGTT CCTCGGAGAT GGAACTGCGG GCCCACTACA TGTGCGGCCT GGTGCTGCTG
GAGGCCGGAC GGCTGACCGA CGCGCTGGTC CCGATCGACC GGGGTGTGGA ACGCGCCGCC
GAACTCGGCG TCACCTGGGG CGGGCACGGA CTGGAGCTGC GGGTCGTGCA GGGCATCACC
CGCTACATGG CCGGGGACTG GGACGGGGCC GAGGTGGCGA CCGAACTCGT CGGCGAGTCG
GTGTCCGGCA TGGTCGTCAC CCGGGTCACG GCGGCGGGTC TGCTGGTCAG TGTCGGCCGG
GGCCGCTTCG ACATCGCCGA CCGGCGGGTG GCACACCTGC GGGAGCGCTG GCACCTGGAC
TTGCAGGTGC TGACCCTGGT CGGACTCACC GGCACCGAAC TGGCGGGACA CCACGGCGAT
CCCGACCGGG CCGCCGCGTT CGCCGAGTGC GCCATCGAAC AGCTGGGGCA GTTCCAGGAG
AACCACTTCG CCACCGTTTC GCTGGCCGCG GTGGGCATCG CCGCGTATGC CGATGTCGCC
GAGGAGGCCC GGAGCGCGAA GGACACCGCC GCCGCGTCCG CCGCCGTCGC GGCGGGGGAG
CGGCTGGCCG CGGTCGGGCA CCGGGTCTTC GACGCGGGCC AGGTCAACTC GGGCACCGTC
GGACCCGAGG GCATCGCCTG GCTGCGGCAG ATCGACGCCG AGACCGCCCG GCTGCGCGGC
GCCTCCGACC CGGCGCTGTG GCGCGAAGCC GTGGCGGCCT TCGGTTACGG CGAGATCTAC
CGGCAGGCCA TCGGCCGGTG GCGGCTGGCC GAGGCGCTGC TGGCGGGCGG CAACCGCGCC
GACCGGGAGG AAGCCGCCAC CCAGTTGGCG CTGGCCGCCA AGACCGCCGA CAAGCTGGAC
GCCGCGCCGC TGCGCAAGGC CGTGGCCGCG CTGACCCGCC GGGCGAGGCT GCGCGGCGAA
GCCTCGGCAG CCGCCCCGGC CAACGGTCTG CTCACCGACC GCGAACTGGC GGTACTGAAG
CTGGTCGCGG TGGGCCACAC CAACAAGCAG GTCGGCGCCG AACTGTTCAT CAGCGACAAG
ACCGTCAGCG TCCACCTGTC GCGGGTGATG GCCAAACTCG GCGTCACCAG CCGCACCGAG
GCCGTCAGCG CCGCCTACAC GGCCGGGCTG CTGGACAGCT GA
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| Protein sequence | MADMARLGTG IPLVARRAEM RILNTALERA RSKRPGALLL SGDAGVGKSR VLSELLDKAR
EDGDLVFVGR CLDTGESALP YLPFAEISDQ IFEYDPELVT GSDALLRLIP GREPGDGGRG
GERDLGQLRL FDALRSVIDR LAADKTVVLA FEDLHWADRS SRELLSFLLA RLTQQRLLII
ATVRSDDLHR RHPLRPLLAE LVRLPHVDRL HLEPFAATDI DVFVRSLSTV DVSETVMRAI
AERSEGNAFL AEELVSAATA DVPRELAEVL LARVERLSAP AQKAIRLASV MGRDFKHRRL
SAVADLTPDE LDLALREAVA HNVLTIDEAT ESYSFRHALL HEAVYHDLLP GERSRLHGRV
AEAMKTEPGA RAAELARHSM ESHDLPTALA ASVAAAEQAE EMGAPAEVLI HTERALQLWS
AVAEPEKVSG SDELELMVWS AWAAGASGEP DRAVAHSRAA IDLADRLGDV VHAAEKRRRL
AEFQLGLDGQ QGQALAVVRE AWDSIADTAP SAGKARLHAT MARAYRANRY RDKAAELAAA
AIETAQAAAA LSDGTDDKER CRLLAAEADA RVTRVMAADR DTHDVDTVVE RINEAAELAR
RAGSSEMELR AHYMCGLVLL EAGRLTDALV PIDRGVERAA ELGVTWGGHG LELRVVQGIT
RYMAGDWDGA EVATELVGES VSGMVVTRVT AAGLLVSVGR GRFDIADRRV AHLRERWHLD
LQVLTLVGLT GTELAGHHGD PDRAAAFAEC AIEQLGQFQE NHFATVSLAA VGIAAYADVA
EEARSAKDTA AASAAVAAGE RLAAVGHRVF DAGQVNSGTV GPEGIAWLRQ IDAETARLRG
ASDPALWREA VAAFGYGEIY RQAIGRWRLA EALLAGGNRA DREEAATQLA LAAKTADKLD
AAPLRKAVAA LTRRARLRGE ASAAAPANGL LTDRELAVLK LVAVGHTNKQ VGAELFISDK
TVSVHLSRVM AKLGVTSRTE AVSAAYTAGL LDS
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