Gene Snas_1738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1738 
Symbol 
ID8882928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1824678 
End bp1825589 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content71% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003510529 
Protein GI291299251 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACA TTCGCGGGCT CGTCAAGCGT TACCGGGCCA CGACCGCCGT CGACGACCTG 
TCGTTCACGG TCGAACCCGG CTCCGTCACC GGTTTTCTCG GCCCCAACGG CGCCGGGAAG
ACCACCACCA TGCGCATCCT GCTCGGCCTG GCCGCCGCCA CCGAGGGCGA AGCCCTCGTC
AAGGGCGAGC GGTACCCGCG GTTGTCCGAA CCGACCCGCT CGGTCGGCGC GCTGCTGGAC
GCCGGTGACG TCCACCCTGG ACGCAGCGCC CTGTCGCACC TGCGTGCCAT CGCCTACGCC
AACCGCATCG GCGACGAGCG GGTCTCGGCC GTCCTGGAGC AGGTGGGCCT GGCCGGGGTG
GCCCGCAAAC GGGTCGGCAA GTTCTCGCTG GGCATGAAGC AGCGGCTCGG CATCGCCGCG
GCGCTGTTGG GTGACCCGGA CGTGTTGATC CTGGACGAAC CGGTCAACGG GCTCGACCCT
GACGGGGTGC GGTGGATCCG GGAGCTGACC CGGGGTCTGG CCGACGAGGG CCGCACCATC
CTGATCTCCA GCCACCTGAT GAGCGAGATG GAACTGACCG CCGACCGGCT GATCATCATC
GCGCGCGGCA AACTGATCGC CGACACCTCG GTATCCGAAC TGGCCGAACG GTTCCAGCGG
GGCATCTCGG TGCGTTCCCC GCGCGCTGAC GAGCTGGCCC AGGTGCTGGA GGCCGAGGGC
GCCGCCGTCG CCCGCGAGGC CGACGCACTG CTGGTCAACG GCCTCGACGT CGCCGCGATC
GGCGACCTGG CCGCCGGCAA GGGCATCGCC CTGCACGAGG TGGCACCGCG CCGCACCACG
CTCGAGGACG CCTATATGGC ACTGACCAGC GACTCCCTGC AATTCGCCGC CCGCCCCGGA
AGGAACCCCT GA
 
Protein sequence
MIDIRGLVKR YRATTAVDDL SFTVEPGSVT GFLGPNGAGK TTTMRILLGL AAATEGEALV 
KGERYPRLSE PTRSVGALLD AGDVHPGRSA LSHLRAIAYA NRIGDERVSA VLEQVGLAGV
ARKRVGKFSL GMKQRLGIAA ALLGDPDVLI LDEPVNGLDP DGVRWIRELT RGLADEGRTI
LISSHLMSEM ELTADRLIII ARGKLIADTS VSELAERFQR GISVRSPRAD ELAQVLEAEG
AAVAREADAL LVNGLDVAAI GDLAAGKGIA LHEVAPRRTT LEDAYMALTS DSLQFAARPG
RNP