Gene Snas_1687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1687 
Symbol 
ID8882877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1778818 
End bp1780155 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content75% 
IMG OID 
ProductFAD dependent oxidoreductase 
Protein accessionYP_003510480 
Protein GI291299202 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.434523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.201156 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGCCA ACCGAACGGT CGTGGTCATC GGCGGCGGAT TCGCCGGTGT GGTGACCGCG 
CGGGAACTGT TGCGGGACCG GCGAACCCGG GTGGTGCTCG CCGAGCCCTC ACCCCGCGTC
GGCAGGGGAG TGGCCTACGG CGCCAGCGAA CCCTGGCACC TGCTCAACTC GCCCGCCGGG
GCGATGAGCG CCGACTCCCA GCACCCCGGC GAGTTCCTCG ACTGGCTGAG CGACCGGGGC
CTGCCCGACG GGGCGGGCGA GTTCCTGCCG CGCGGTACCT ACGGCGACTA CCTGCGCGAC
ACCTGGGACG CGACGCTCAA GGCGGCCGGG GACCTGGTGA CGGTGCGCTC CGACACCGCG
GTCCGGTTGC GGCCGTGGGA CGGCGGCGTC GAGGTCGGCT TCGCGTCGGG GGTCGTGGAG
TACGCCGACG ACGTGGTGCT CGCGGTGGGG AACCCCAAGT CCAGCGGCCC GATCCGGCGC
GGCGCGCCGG GGTACGTGGC CAACCCGTGG CGGCTGGGGG CCTTCGACCG GCTGGGAGCC
GACGCGCCGG TGCTGCTGGT CGGCACCGGA CTGACCGCCG TGGACGTGAT GCTGAGCCTG
TCGCGGCGCG GCCATCGGGC GCCGGTGCTG GCGGTGTCCC GGCACAGCCT GGTGCCCCGG
TCGCACCGCA CCCGCCCGGC TGGACCGGCC GACGCTCACG CGGGCGAGCT GCGGTTCCGG
GCGGAGACGC TTTCCGGGTT GCTGCACCAG GTGCGCGAGG CCGCCCGGCC CGACTGGCGG
GCGGTGGTGG ACGGCATGCG CGGCGACCTC AACACGATGT GGCGCGGCCT GTCCGAGGGC
CAGCAGCGAG GGTTCCTGAC CCATCTGGCC CGCTACTGGG AGGTGCACCG GCACCGGATG
GCGCCGAAGG TGGCCGCCGA GATCGCCGAG CTGACCGCGT CGGGTGCCTG GGTGGTGCAG
GCCGACGCCA TCGTCAGCAG CCGCCCACTG GGGAGCGACG GCATCGAGGT GTCGTTCGCG
TCCGGAGTGG CCCGTCGCTT CGCCACCGTG GTCAACTGCA CCGGACCGGC CCGGCTCCCG
TTGGGCGCCA ACGATCTCGT CCGGCGGCTA ATCGACGAGG GTCACGCCCG TCCGGGTCCG
CACCGGCTGG GCCTCGACGT GGACGTCGAG GGCCGTATCG TCGACGGCGG CGGCACCGTC
AACGATCGGG TGTGGACGAT CGGCGCGTTG CGGCGCGGCG CGCTGTGGGA GACCACGGCG
GTTCCCGAGA TCCGCGAGCA GGCCGCGCGG CTGGCCGTCC GGCTCACCGG GACGGTGCGC
CCCCGAGTGG TGCTTTAG
 
Protein sequence
MAANRTVVVI GGGFAGVVTA RELLRDRRTR VVLAEPSPRV GRGVAYGASE PWHLLNSPAG 
AMSADSQHPG EFLDWLSDRG LPDGAGEFLP RGTYGDYLRD TWDATLKAAG DLVTVRSDTA
VRLRPWDGGV EVGFASGVVE YADDVVLAVG NPKSSGPIRR GAPGYVANPW RLGAFDRLGA
DAPVLLVGTG LTAVDVMLSL SRRGHRAPVL AVSRHSLVPR SHRTRPAGPA DAHAGELRFR
AETLSGLLHQ VREAARPDWR AVVDGMRGDL NTMWRGLSEG QQRGFLTHLA RYWEVHRHRM
APKVAAEIAE LTASGAWVVQ ADAIVSSRPL GSDGIEVSFA SGVARRFATV VNCTGPARLP
LGANDLVRRL IDEGHARPGP HRLGLDVDVE GRIVDGGGTV NDRVWTIGAL RRGALWETTA
VPEIREQAAR LAVRLTGTVR PRVVL