| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1622 |
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| Symbol | |
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| ID | 8882812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 1713733 |
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| End bp | 1715070 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | TRAP C4-dicarboxylate transport system permease DctM subunit |
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| Protein accession | YP_003510418 |
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| Protein GI | 291299140 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.14411 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000197142 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCTCGGCA TCTGGGCGCT GGTCGCCTAC ATCGTCGTCA TCATCGCGTG GAACGGACTG
CTGAAACGCA ACATCGGTGA GGCGATGATC ATCGGTTTCG TCGCGGTCGC CGCGTTCGGC
GGCGGCTCGA TACTCGAGGT CGGCTGGGCG GGAATCAAAG CCGCCGCCAC CGAGGAGATC
GTGTTCGCGG CGTTGACGTT CGTCTTCATG GGATTCGTCC TGTCCAAGAC CGGCGTCGTC
GACCAGCTGA TCGCGATGCT CAACTCACTG CTCGGCAAAC GCCGGGGCGG TGCCGGTTAC
GTGTCGACGA TCGCCGCGGC GATGTTCGGA GCCGTGTCCG GTTCCGGCTC CGGAAACGCC
GCCGCCGTCG GCTCGGTGAC CATCCCGTGG ATGGCCAAGT CGAACTTCAG CCCCAAGCTG
TCGGCGACCG TCGTTGCCGG GAACGCCGGG CTCGGCATCG CCATCCCGCC CAGTTCCTCG
CTGTTCATCC TCACCGGTTC GGCCGCCGTG GCCAGCTATG TCACCGCCGA CCAGCTGTTC
CTGGCGCTGT TCGCCGGTGG CGCCTGGACG CTGCTGTACC GGCTGGTGCT GATGTTCTAC
TTCGTCCGCC GCGACAAGAT CGGCGCGGTC GACCCGTCGA TGATCGAACC GTTCGGACGC
ACCTTCGCCG CGGGCTGGTC GAGCCTGCTG GTCTTCGTCG GCATCATCGT GCCGGTGCTG
CTGACCTCCG ACCTCACCAG CGACGCGGTG ATCTCCTGGA TCGGCGAGGC CCCCGCCGAC
GCGATCTCGA TCATCACCTG GATCCCGGTC CTGGTGACGA TCATCGGGTT GATCCTGGGC
CGCCGGGCCC TGCCCCGTCG GGGCACCGAC TGGTGGAAGC TCTTGGGCGA GGTCGGGCCG
CGCTACGCCG TCATCGGCGC GACGCTGTTC TTCGCGTTCG CCGCCGCGGC CACCCTGACC
GAGCTCGGGC TGGCCGAACA GCTGGCCAAA TTGCTGGGCG AGTTGGACGC GCCCGCCTTC
ATCGTGTCGA TGGTCGTCGG GCTGCTGGTG GTCGGTGTCG CCGCGCCGTT GACCGGCACC
GCCACGATCG CCGCGATCGG CCCGGTCGCG TTCACCACCC TCATGTCCGC GGGTGTCTCG
CCGATCCCCG CCGCGGTCGC GATCCTGATC TTCGCCTCCA CCGAGGGCGC CTCGCCACCC
GGCGCGGCAC CGATCTACAT CGCCAGCGGC ATCTCCGGCG TGAACCCGGC GCGCACCTTC
GTCCCGCTGG TGGTCTGGTA CGTGCTGCCG ATCCTGGTCA TCGGCTCGCT GGTCGCCATC
GGCGCGCTGC CGGTCTAG
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| Protein sequence | MLGIWALVAY IVVIIAWNGL LKRNIGEAMI IGFVAVAAFG GGSILEVGWA GIKAAATEEI
VFAALTFVFM GFVLSKTGVV DQLIAMLNSL LGKRRGGAGY VSTIAAAMFG AVSGSGSGNA
AAVGSVTIPW MAKSNFSPKL SATVVAGNAG LGIAIPPSSS LFILTGSAAV ASYVTADQLF
LALFAGGAWT LLYRLVLMFY FVRRDKIGAV DPSMIEPFGR TFAAGWSSLL VFVGIIVPVL
LTSDLTSDAV ISWIGEAPAD AISIITWIPV LVTIIGLILG RRALPRRGTD WWKLLGEVGP
RYAVIGATLF FAFAAAATLT ELGLAEQLAK LLGELDAPAF IVSMVVGLLV VGVAAPLTGT
ATIAAIGPVA FTTLMSAGVS PIPAAVAILI FASTEGASPP GAAPIYIASG ISGVNPARTF
VPLVVWYVLP ILVIGSLVAI GALPV
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