| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1619 |
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| Symbol | |
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| ID | 8882809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 1710621 |
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| End bp | 1711286 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | transcriptional regulator, GntR family |
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| Protein accession | YP_003510415 |
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| Protein GI | 291299137 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00167189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000109727 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCCGCTC CAGGCACAGT CCACCCACGT CCGCCCGGCA GCAAGGCCGA GTACGTGCAC
GAGGTACTGC GCAACGAGAT CATGAGCGGC CAACTCACCG CGGGCGCCGC CGTCCCCCAG
GACGAGATCG CCCGCCGCCT CGGCGTCTCC ATCACCCCGG TCCGAGAAGC CCTCCGCCGC
CTCGAGAGCG AAGGCCTCAT CTCCTACCGC CCCCACCGTG GCGCCACGGT CTCCGAGCTC
AGCCAAGACG CCGCCCACGA GCTCTACCTC CTGCGCGGCG CCATCGAGGG CCTCTGCGCC
CGCCTGGCCG CCGACCGCAT CACCGACGCC GAACTCGCCG AACTCCACCG AATCCACGAC
CTCATGCTCA CCGAACAAGC CAACGGCTCC GTCGAGAACC TGGCCGACCA CAGCCGCCAG
TTCCACGACC TGATCGCCCG CGCCGGCGGC CCCGCCTTCC TGGCCGACCA CCTCAGCTCC
ATCTGGAAGA ACCACCCGGT CCCCACCGAG AACTCCCTGT GGCACGACCC CACCGACGCC
GCCCGCTTCC TGGAAGCCCA CCGCGACCTC CTCGAAGCCC TCACCGCCCG CGACGCCACC
CGAGCCGAGC GCGTCATGAT CGACCACGTC GAACTGGCCG GAGCCGCCCG CACCACCCAC
CAATAA
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| Protein sequence | MAAPGTVHPR PPGSKAEYVH EVLRNEIMSG QLTAGAAVPQ DEIARRLGVS ITPVREALRR
LESEGLISYR PHRGATVSEL SQDAAHELYL LRGAIEGLCA RLAADRITDA ELAELHRIHD
LMLTEQANGS VENLADHSRQ FHDLIARAGG PAFLADHLSS IWKNHPVPTE NSLWHDPTDA
ARFLEAHRDL LEALTARDAT RAERVMIDHV ELAGAARTTH Q
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