| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1617 |
|---|
| Symbol | |
|---|
| ID | 8882807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 1706269 |
|---|
| End bp | 1707582 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | DNA-cytosine methyltransferase |
|---|
| Protein accession | YP_003510413 |
|---|
| Protein GI | 291299135 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00132126 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCACCTA TCGACTCCCC CCGATCCAAG GCCCGGACGT GTGTCGAACT GTTCGCCGGG
GCGGGTGGGT TGGCGATGTC CGTGCACGCT GCGGGTTTTC GCCCCCTACT GGTCAATGAG
TTCGCCAAGC GTGCTTGTGA GACCTTGCGC GCGAACGGGG CGGTCGATCG TGGCGATGAT
CTGAGTGTTC CCGATCCTGG CGGTCCGTGG CCGCTAGTTG AGGGGGATGT GCGTCAGGTC
AAGTTCGAGT ATCTCGCGGA GGCGGGGGTC GATGTCTTGG CTGGTGGGCC GCCTTGTCAG
CCGTTCAGTC TCGGCGGGGC GCATAAGGGG GTGGAGGACG AACGGAACAT GTTCCCACAG
ATGTTCCGCG CGATCCGTGA GATGCGGCCC AAGGCCGTCA TCTGTGAGAA CGTGAGAGGA
CTTCTGCGGC CTTCGTTCAA ACCCTACTTC GACTACATCC TTCGCGAACT CGAGTTGCCG
TTCCTGGAAC GCGCGGAGGA CGCGTCGTGG GACCAGCATG ACGCGATTCT CAAACGGGCG
GTCGCGGGTT CTCGCTCGGT GGCGGATGAA CGCTACGACG TCTATTTGAC CCCGGTCAAC
GCCGCTGACT TTGGCGTCCC GCAGATCCGA CAACGTGTCA TCATCGTCGC CTTTCGCTCC
GACCTTCGGG TCGATTGGGA TAGTTTTCGC CCGAGGCCTC GGTACTCGGG GGAAGCGCTG
TGGGCGTCGA TGCGAGATGG CTCCTATTGG GATCGACACA AGGTACCGTC CCGTGTACGG
CGTCGCGTGA TGCGTGAATT GCCCGACGCT CCACTCGTCG AGGACGGCCT GAAGCCGTGG
CGAACGTTGC GCGACGCTAT TCAGGGCATC GACGACAACA CTGGCAAGCC GTTGCCGTCG
ATCCCGGCGA AGTCGCTGGA CAGGACCGAG TACCACCATG GCGGCTTCAC CGAACACATA
GGGTGGCCTG ACGCACGAAA GTACACCGGA CACACTCCCA ACCTGCTCGA TCGTCCCGCC
AAGACAGTAA AGGCTGGAGT ACACGGGGTA CCGGGAGGTG AGTCCGTCAT GGAACTGGAT
GACCCCGAAT ACGACGGCAA GGGATATAGG TACATGACGG TGCGCGAGAC CGCCCGAGTC
ATGACATTCC CCGACGATTG GACGCTCGCG GGACCTCGAG GGGAGAAGAT GCGCCAGCTC
GGCAACGCAG TACCGGTCCG GCTCGGTCAC GTCTTCGCCA AAGCCGTCGC CCGTGCCTTG
GATGCCGCGG ATGCGCGTGA GTGGAGTTCA AATGGCCGAA CAGCGAGAAA CTAG
|
|---|
| Protein sequence | MSPIDSPRSK ARTCVELFAG AGGLAMSVHA AGFRPLLVNE FAKRACETLR ANGAVDRGDD
LSVPDPGGPW PLVEGDVRQV KFEYLAEAGV DVLAGGPPCQ PFSLGGAHKG VEDERNMFPQ
MFRAIREMRP KAVICENVRG LLRPSFKPYF DYILRELELP FLERAEDASW DQHDAILKRA
VAGSRSVADE RYDVYLTPVN AADFGVPQIR QRVIIVAFRS DLRVDWDSFR PRPRYSGEAL
WASMRDGSYW DRHKVPSRVR RRVMRELPDA PLVEDGLKPW RTLRDAIQGI DDNTGKPLPS
IPAKSLDRTE YHHGGFTEHI GWPDARKYTG HTPNLLDRPA KTVKAGVHGV PGGESVMELD
DPEYDGKGYR YMTVRETARV MTFPDDWTLA GPRGEKMRQL GNAVPVRLGH VFAKAVARAL
DAADAREWSS NGRTARN
|
|---|
| |