Gene Snas_1543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1543 
Symbol 
ID8882731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1625598 
End bp1626431 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content68% 
IMG OID 
Productglutamate racemase 
Protein accessionYP_003510339 
Protein GI291299061 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.79894 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAAG CCCCCATTGG GATCTTCGAC TCGGGCGTCG GCGGTTTGAC CGTCGCCCGT 
GCGATCCGCG ACCTGCTGCC CGCCGAACGT CTCCTCTACG TCGGCGACAC CGCCCGCGCC
CCCTACGGCC CGCGCTCCAT CGCCCAGATC CGCCAGTACA CCCTCGACGC CTGTGACTAC
CTGGTCGGAC AGGGCGTCAA GGCACTCGTC ATCGCCTGCA ACACCGCCAG TTCCGCCAGC
CTCGCCGACC TGCGCGAGCG CTTCGACGTC CCGGTCCTGG AGGTCATCCG TCCCGCCGCC
CGCCGCGCGG TCACCGTCAC CCGCAACGGC CGCGTCGGTG TGATCGGCAC CATCGCCACC
GTCACCAGCG GCGCGTACGG TGATGCCTTT CACTCGGCCC CTTCCGTCAC GCTCACCAGC
GTCGCCTGTC CCGCTTTCGT GGACTTCGTG GAGCGCGGAG TGACAACTGG ACGACAGTTG
CTGGGTCTGG CACAGGGCTA CCTTGAGCCG CTACAGCGCA GCCAGGTGGA CACTTTGGTG
CTGGGCTGTA CGCATTACCC GCTACTGGCC GGGCTCATCG GCTTGGTCAT GGGAGACGAG
GTGACGCTGG TATCCAGTTC CGAGGAAGCC GCCCGCGACG TCTACAAGGT CCTCAACGAA
CGCGACCTGC TGCGCGACAA CACACTGCCC GCGCCGGCAC ACCGCTTCGG GGCCACCGGA
GACACCGGCG CGTTCGCTCG GCTGGCACAG CGAGTCCTCG GACTGCCGAT CGGCGATCTG
CCGGTGGAGG CACTCCCCAG CCGATGGCGT GGACTCATGA AGGTGGACAC ATGA
 
Protein sequence
MTEAPIGIFD SGVGGLTVAR AIRDLLPAER LLYVGDTARA PYGPRSIAQI RQYTLDACDY 
LVGQGVKALV IACNTASSAS LADLRERFDV PVLEVIRPAA RRAVTVTRNG RVGVIGTIAT
VTSGAYGDAF HSAPSVTLTS VACPAFVDFV ERGVTTGRQL LGLAQGYLEP LQRSQVDTLV
LGCTHYPLLA GLIGLVMGDE VTLVSSSEEA ARDVYKVLNE RDLLRDNTLP APAHRFGATG
DTGAFARLAQ RVLGLPIGDL PVEALPSRWR GLMKVDT