| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1277 |
|---|
| Symbol | |
|---|
| ID | 8882463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 1352459 |
|---|
| End bp | 1353793 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | NADH dehydrogenase I, D subunit |
|---|
| Protein accession | YP_003510079 |
|---|
| Protein GI | 291298801 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.494921 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.687145 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCACGA AAGAAGAGAC CACCGACGCC TACGCCGACG CCCGCGACAC CACCGAGGGC
AAGGTCTTCA CCGTCACCGG CGGCGACTGG GACAGCGTCA TCGGCGGCCA CGACCCGGTC
AGCGACGAAC GCCTCGTCGT CAACATGGGC CCGCAGCACC CCTCGACCCA CGGCGTTTTG
CGCCTCGTGG TCGAGATGGA GGGTGAGACG GTCCGGGAAC TGCGCCCGGT CATCGGCTAC
CTGCACACCG GTATCGAGAA GAACACCGAG TACCGAACCT GGACCCAGGG CACCACCTTC
GTCACCCGCG CCGACTACCT GGCCCCGATC TTCAACGAGA CCGCCTACTG TCTCGCGGTC
GAGAAGCTGT TGGGCATCGA GCCGCCGCAG CGCGCCACCA CGATCCGCGT GATCATGATG
GAGCTCAACC GGATCGCCTC CCACCTCGTG GGTCTGGCCA CCACCGGTAT GGAGCTCGGC
GCACTGTCCA TGATGATCTA CGGCTTCCGC GAGCGGGAGT ACATCCTGGA CATCTTCGAG
GCCGTTTCGG GTCTGCGCAT GAACATGGCC TACGTCCGCC CCGGCGGCGT CGCCCAGGAC
ATGCCCGACG AGGCGGTCAC CAAGATCCGC GACTTCCTCA AGTACATGCC CGGCTGCATC
AACGACTACG AGAAACTGCT GTCGGGCAAC CCGATCTGGC AGGAACGCAC CCAGGACATC
GCCTACCTGG ACGTGTCGGG CTGCCTGGCC ATGGGCGTCA CCGGACCCGT GCTGCGGGCC
GCCGGACTGC CGTGGGACCT GCGCAAGACC ATGCCGTACT GCGGCTACGA GGACTACGAC
TTCGAGGTCG CCACCCACAC CGGCGCCGAC GTGTGGGGCC GCTACCTGGT GCGGCTGGAG
GAGATGCGGC AAAGCCTGCG CATCGTCGAG CAGGCCCTGG AGCGGCTCGA ACCCGGCCCC
GTCATGGTGG AGGACAAGAA GATCGCCTGG CCCGCGCAGC TGTCGCTGGG CGGCGACGGC
ATGGGCAACT CGCTGGCCCA CGTCCGCAAG ATCATGGGCC AGTCGATGGA GTCGCTGATC
CACCACTTCA AGCTCGTCAC CGAGGGTTTC CGGGTTCCGC CCGGCCAGGT GTACGTCCCG
ATCGAGGCGC CGCGCGGCGA ACTGGGCATC CACCTGGTCT CCGACGGCGG CACCCGCCCC
TATCGGATGC ACATGCGCGA ACCCAGTTTC GTGAACCTGC AAGCCGTCCC GGCCCTGGCC
GAAGGCGGCC TTCTGGCCGA CGTCATCGCG GGCGGGGCCT CACTCGACCC GGTTATGGGA
GGTTGCGACC GGTAA
|
|---|
| Protein sequence | MTTKEETTDA YADARDTTEG KVFTVTGGDW DSVIGGHDPV SDERLVVNMG PQHPSTHGVL
RLVVEMEGET VRELRPVIGY LHTGIEKNTE YRTWTQGTTF VTRADYLAPI FNETAYCLAV
EKLLGIEPPQ RATTIRVIMM ELNRIASHLV GLATTGMELG ALSMMIYGFR EREYILDIFE
AVSGLRMNMA YVRPGGVAQD MPDEAVTKIR DFLKYMPGCI NDYEKLLSGN PIWQERTQDI
AYLDVSGCLA MGVTGPVLRA AGLPWDLRKT MPYCGYEDYD FEVATHTGAD VWGRYLVRLE
EMRQSLRIVE QALERLEPGP VMVEDKKIAW PAQLSLGGDG MGNSLAHVRK IMGQSMESLI
HHFKLVTEGF RVPPGQVYVP IEAPRGELGI HLVSDGGTRP YRMHMREPSF VNLQAVPALA
EGGLLADVIA GGASLDPVMG GCDR
|
|---|
| |