| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1273 |
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| Symbol | |
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| ID | 8882459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 1349380 |
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| End bp | 1350753 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | geranylgeranyl reductase |
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| Protein accession | YP_003510075 |
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| Protein GI | 291298797 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0513601 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTCAC AAGCCTTGAT CCAGCCGCTG AGCAGCCCAA ATGCCACGGC CGAACTGAAA
ACCGACAATC GCACCGCGAG GATCACCGTG CCCAGCAGTA ATCCAGCCCC CAACGACGCC
GACGTCATAG TCGTCGGCGC GGGACCGGCT GGCTCGGCGA GCGCGTACTA CCTGGCCAGT
CACGGCCTCG ACGTCCTGTT GTTGGAGAAG ACCAGTTTCC CCAGGGAGAA GGTCTGCGGC
GACGGTCTGA CCCCCAAGTC GGTCAAGGCC CTCATCCGCA TGGGCATCGA CACCAGCCCC
GAAGCGGGCT GGACCCACAA CAAGGGCCTG CGGGTCGTCG CCGGGGACAC GCAGCTGAGC
CTCGACTGGC CGAAACTCGA CGACTACCCC GCCTACGGGC TCACCCGCAC CCGGCTCGAC
TTCGACGAGC TGCTGGCCGA CCGCGCCGTG TCCGCCGGGG CCCGGCTGCT GACCGAGGTC
AACGTCACCA CCCCGATCTT CGACCGCGCC GGACGCGTGT GCGGCGTCGA AGCCGTCGTC
GGCGCCGAGA AGCGGCCCGC CACCTACACC GCACCGATCG TGGTGTCGGC CGACGGCGTC
TCGGCCCGGA TGGCCCTGGC ACTGGGCATC GCCAAACGCG ACGACCGTCC ACTGGGGGTC
GCGGTACGGC GCTACTACAA GAGCCCCGCC AAACACGACG ACGAGTACCT CGAGTCGTGG
CTGCAACTGC GCAGCGCCGC CAACCCCAAC GTGCTGCTGC CCGGCTACGG CTGGATCTTC
GGGCTGGGCG ACGGCCGCGT CAACGTCGGC CTCGGCGTCC TGAACTCCTC CACCGCGTTC
GGCAAGACCA ACTACCGCAA GCTGTTGACC GACTGGCTGT CGTCCACCCC CGAGGAATGG
GGCATGCGGG ACGAGTCGCA GGCCGACGGA CCGATCCGCG GCGCCGGGCT TCCGATGGGC
TTCAACCGGG TACCGCACTA CAGCCGGGGG CTGGTGCTGG TGGGCGACTC CGGCGGCATG
GTCAACCCGT TCAACGGCGA GGGCATCGCC TACGCGATGG AGTCCGGCGA GATCGCCGCC
CGCTTCGTCG CCGACGCGCT GGCCAAACCC GCGGGGCCGC GCCGCGAGGC CGTCCTGCGG
CAGTACCCGG TCGAACTGAA ACGCGAGTTC GGCGGCTACT ACCGGATGGG CGACATCTTC
GTGAAGCTGA TCGGCAACCC GACGGTGATG CGGCTGTGCA CCGAGCACGG CCTGCACCAT
CCGCTGCTGA TGCGCTTCGT TTTGAAGCTA CTGGCGAACC TCACCGACGC GCGCGGTGGC
GACGCCATGG ACAAACTGAT CAACGGACTG TCGAAGGTGG CGCCTGCCGC ATGA
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| Protein sequence | MHSQALIQPL SSPNATAELK TDNRTARITV PSSNPAPNDA DVIVVGAGPA GSASAYYLAS
HGLDVLLLEK TSFPREKVCG DGLTPKSVKA LIRMGIDTSP EAGWTHNKGL RVVAGDTQLS
LDWPKLDDYP AYGLTRTRLD FDELLADRAV SAGARLLTEV NVTTPIFDRA GRVCGVEAVV
GAEKRPATYT APIVVSADGV SARMALALGI AKRDDRPLGV AVRRYYKSPA KHDDEYLESW
LQLRSAANPN VLLPGYGWIF GLGDGRVNVG LGVLNSSTAF GKTNYRKLLT DWLSSTPEEW
GMRDESQADG PIRGAGLPMG FNRVPHYSRG LVLVGDSGGM VNPFNGEGIA YAMESGEIAA
RFVADALAKP AGPRREAVLR QYPVELKREF GGYYRMGDIF VKLIGNPTVM RLCTEHGLHH
PLLMRFVLKL LANLTDARGG DAMDKLINGL SKVAPAA
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