| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1264 |
|---|
| Symbol | |
|---|
| ID | 8882450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 1341913 |
|---|
| End bp | 1342398 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, AsnC family |
|---|
| Protein accession | YP_003510066 |
|---|
| Protein GI | 291298788 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00307844 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTCAT CGCTGGTCCT GGACGAGATC GACCACCATC TGCTCGATCT GCTGCAACAC
GACGCCGACC GCACCCTGCG CGAGTTCGGC GACGACGTCG GTCTGACCCC CAGCGCCGTG
CAGCGCCGCA TCGCCCGCTA TCGCAAGGCG GGCCTGATCT CCCGGCAGGT GGCGATCCTG
GACCCGCACC AGCTGGGGCC GACGGTGCTG GCCAGCGTGA TGATCACGCT CGTGCACGAA
TCCCTGGAGC ACCACAAGCA GTTCACCGAC CGGATGCGCG CCACCCCCGA GGTGCAGCAG
TGCTACCTGA TCGCCGGGCC GTGCGACTAT CTGGTCCTGT TGGCCGCCAA CAGTCCCCGC
CATTGCAGCC AACTGGGCAA CCGACTGTTC AAAAGCGACG ACAACATCAA ACGCTACGAG
ACGTCGATGG TGTTCGACAC CATCAAGGCC GGGCTGACGA TCCCGCTCAC CGACCGCTCG
GGGTGA
|
|---|
| Protein sequence | MPSSLVLDEI DHHLLDLLQH DADRTLREFG DDVGLTPSAV QRRIARYRKA GLISRQVAIL
DPHQLGPTVL ASVMITLVHE SLEHHKQFTD RMRATPEVQQ CYLIAGPCDY LVLLAANSPR
HCSQLGNRLF KSDDNIKRYE TSMVFDTIKA GLTIPLTDRS G
|
|---|
| |