Gene Snas_1202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1202 
Symbol 
ID8882388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1282410 
End bp1283036 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content69% 
IMG OID 
Product30S ribosomal protein S5 
Protein accessionYP_003510005 
Protein GI291298727 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.672112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0445875 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCTG AAAGGCGCCA GAGCGGTACC GGCGAAGGCG GTGGCCGCGA AGGCGGTCGC 
GGTCGCCGGG ACCGTCGTGA GGGTGGCCGT GGCGGTAAGG ACGCCGCGGA CAAGTCCCCG
CACATCGAGA AGGTCGTATC GATCAACCGT GTCGCCAAGG TCGTCAAGGG CGGTCGCCGG
TTCAGCTTCA CCGCGCTGGT CGTGGTGGGC GACGGCAACG GCCAGGTCGG CGTCGGCTAC
GGCAAGGCCA AAGAGGTTCC CGCGGCGATC GCCAAGGGTG TCGAAGAGGC CAAGAAGAAC
TACTTCACCG TGCCGCGCAT CGGCGGGACC ATCCCGCACC CGATCATCGG TCGTGACGCC
GCCGGCGAGG TGCTGCTGAA GCCCGCCAGC GCCGGTACCG GTGTCATCGC CGGTGGTTCG
GTGCGCGCCG TGCTGGAGTG CGCCGGTATC CACGACGTGC TCTCCAAGAG CCTCGGCTCG
GACAACGCGA TCAACATCGT CCACGCGACG GTGAAGGCGC TCAAGACCCT CGAGGGTCCC
GAGACCGTCG CGGCCCGTCG CGGTCTGCCC ATCGAAGACG TCGCCCCCGC CGCCATGCTG
CGGGCCCGCG CCGGACTTCA GGCATAG
 
Protein sequence
MAAERRQSGT GEGGGREGGR GRRDRREGGR GGKDAADKSP HIEKVVSINR VAKVVKGGRR 
FSFTALVVVG DGNGQVGVGY GKAKEVPAAI AKGVEEAKKN YFTVPRIGGT IPHPIIGRDA
AGEVLLKPAS AGTGVIAGGS VRAVLECAGI HDVLSKSLGS DNAINIVHAT VKALKTLEGP
ETVAARRGLP IEDVAPAAML RARAGLQA