Gene Snas_1200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1200 
Symbol 
ID8882386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1281402 
End bp1281941 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content63% 
IMG OID 
Product50S ribosomal protein L6 
Protein accessionYP_003510003 
Protein GI291298725 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.046217 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGTA TCGGACGTCA GAGCATCCCG GTTCCCGGTG GTGTCGAAGT CACCATCGAC 
GGAACCGACG TGAAGGTCAA GGGCCCCAAG GGCGAGCTGT CGCGGACCCT GGTCGAGCCG
ATCACGATCG AGAAGAACGA GGATGGTTCG CTGCAGCTGA ACCGCCCCGA CGACGACCGT
CGTTCCCGCG CGATGCACGG CCTGTGCCGT TCGCTCGTGA ACAACATGGT CATCGGCGTC
TCCGAGGGCT ACAAGAAGAG CCTGGAGATC AACGGCACCG GTTACCGCGT GCAGCAGAAG
GGCAGCAACC TGGAGTTCGC GCTCGGCTTC TCGCACCCGG TGGTCATCGA GCCGCCGGAC
GGCGTGAAGT TCTCGGTCGA GAAGCCGACC CTGTTCCACG TCGAGGGAAT CGACAAGCAG
GTCGTCGGTG AGATCGCGGC GAACATCCGC AAGATTCGCC CGCCGGAGCC CTACAAGGGC
AAGGGCGTGA AGTACGTGGG CGAACACATC CGTCGCAAGG CGGGGAAGGC AGGTAAGTAA
 
Protein sequence
MSRIGRQSIP VPGGVEVTID GTDVKVKGPK GELSRTLVEP ITIEKNEDGS LQLNRPDDDR 
RSRAMHGLCR SLVNNMVIGV SEGYKKSLEI NGTGYRVQQK GSNLEFALGF SHPVVIEPPD
GVKFSVEKPT LFHVEGIDKQ VVGEIAANIR KIRPPEPYKG KGVKYVGEHI RRKAGKAGK