Gene Snas_1133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1133 
Symbol 
ID8882319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1210276 
End bp1211352 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509936 
Protein GI291298658 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0289108 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGGGC TATGCGCTCT GGTGTTGAGC GTCTTCGTCG CCCCCGCTGA GGCGGTGGCG 
AAGGAGGGCA ACGTCAACAA GAAGCTCGAC AAGGCCATCG ACGAGTATCA GGAAGCCAAA
CAGGACCTCG CCAAGTCCAA GGGCCGCAAG AAGACCATCA AGAAGGACAT CGCCGACACC
AAGAAGGACG TCAAGCGTCT GAAGGTCGAG GTCAACGAGT TCGCGGCCGC CGCCTACAAG
AGCGGCGGCC TGCCACCGGC GGTGGAGATC CTGTCGGCGG GTGACCCCGA CACGGCCGTC
GACACCATCG CGATGACCAG TTACCTGGGC GAACAGTCGG GTCGCAAACT CAGCCAGCTC
GTCAACGCCA AGGAGGACCT CGCCGCCGAG GAGGAATCAC TCGACGACGA GATCGACAAG
GGCGAGAAGG CCGAGAAGAA GATGAAGGAC CTGCGTGACA AGGCGGCCCG GGACGTGGCC
GCCGGAGGCG GGGACGCCGT CACCGGGCCC GCCGCCAGCA GCGCTCCACC GGCCGAAGCG
GCGCCGCGCA ACTCCGACGG CTCCTGGCCG GACGAGGGCT GTACCCAGGA CGATCCGACC
ACCGGCGGCT GCATCTCGCC GCGGATGGAA CACGCCCTGG AGCAGGCGGT CATCGTGGGC
TACAACAAGA AGACCTCGTG CTATCGCCCC TATGAGGACG GTGGTGACCA CAACGAGGGC
AAGGCCTGCG ACTTCACGGT CGGCTCCAAC GGGGCCGCCG CCAGCGGGGA CGCCAAGACC
TACGGCGACC ACACCGCCGA CTGGTTCGTC CAGAACGCCG ACGCCCTGGG TGTCCGGGTC
GTCATCTGGT ACAACATGAT CTGGAATCCG CTGCGGGGCG GCTGGCACGC CTACGACGGC
GGCGGTACCG GAGATCCCAA CTCCGACCAC ACCAACCACG TACACGTGTC GATCTTGTTA
GCCGGGCTCG GCCGCGCCGA TGGCGCGGCC GAGCTTCTCA CGGCTCCAGC GGGATTCAGT
CGAAGTCCAC CATGGAGTAG TTGCGCAGCT TCTCCAGCCG GTGGAACGAG TCGATGA
 
Protein sequence
MVGLCALVLS VFVAPAEAVA KEGNVNKKLD KAIDEYQEAK QDLAKSKGRK KTIKKDIADT 
KKDVKRLKVE VNEFAAAAYK SGGLPPAVEI LSAGDPDTAV DTIAMTSYLG EQSGRKLSQL
VNAKEDLAAE EESLDDEIDK GEKAEKKMKD LRDKAARDVA AGGGDAVTGP AASSAPPAEA
APRNSDGSWP DEGCTQDDPT TGGCISPRME HALEQAVIVG YNKKTSCYRP YEDGGDHNEG
KACDFTVGSN GAAASGDAKT YGDHTADWFV QNADALGVRV VIWYNMIWNP LRGGWHAYDG
GGTGDPNSDH TNHVHVSILL AGLGRADGAA ELLTAPAGFS RSPPWSSCAA SPAGGTSR