Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1127 |
Symbol | |
ID | 8882313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 1200588 |
End bp | 1202897 |
Gene Length | 2310 bp |
Protein Length | 769 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | Terpene synthase metal-binding domain-containing protein |
Protein accession | YP_003509930 |
Protein GI | 291298652 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0393162 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCTG AGCAGCCGTT CACACTGCCC AACTTCTACA TGCCCTACCC GGCACGGTTG AACCCGAACC TTGCCGGCGC CCGCGGTCAC ACGATGGCGT GGGCCAAGGA CATGGGGATG CTCGACTCCC CGTCCGCCGG TGGCGGGTTG ATATGGGACG AGGCCGAACT GGCGCGGCAC GACTATGGAC TGTTGTGCGC CTACACGCAT CCCGACTGCG ATCAGGCGAT GCTGGATCTG ATCACCGACT GGTACGTGTG GGTGTTCTTC TTCGACGACC ACTTCCTGGA GCAGTTCAAG CGCACCCGCG ACACCGTGGG CGCCAAGGAG TACCTGGACC GGCTGCACCT GTTCATGCCC GTGTCGGGCC AGGAGCTGCC GGAGCCGACC AACCCGGTCG AGAAGGGACT GGCGGACCTG TGGCAGCGCA CCGCGCCGCA TCGGTCCGAG GACTGGAAGC AGCGGTTCTC CGTCAGCACC CGCAACCTGC TGATGGAGTC GCTGTGGGAA CTGTCCAATA TCACCACCGG CCGGGTGGCG AACCCGATCG AGTACGTGGA GATGCGGCGC AAGGTCGGCG GGGCGCCGTG GTCGGCGAAC CTCATCGAGC ACGCCGTGAA CGCCGAGGTG CCAGCGCGAC TGGCGCCCAC CCGGCCGTTG CGGGTACTGC GGGACACCTT CTCCGACGCG GTGCACCTGC GCAACGACCT GTTCTCGTAC CAGCGGGAGG TGCAGGACGA GGGCGAGAAC GCCAACGCCG TCCTGGTGTT CGAGAAGTTC CTGGGACGGT CCACTCAGGA GTCAGCGGAT CTGGTCAACG AGCTGTTGAC CTCGCGGCTG CACCAGTTCG AGTCGACGGC GCTGACCGAG ATGCCGCTAC TGGTGGCCGC CAAGGGGGTC ACACCGGACC AGCAGGCCGC GGTGGCCGCC TACGTGAAGG GCTTGCAGGA CTGGCAGTCG GGCGGGCACG AGTGGCATAT GCGCTCCAGC CGGTACATGA ACGAGTCGGC CCGCGCGGTG CCGTTGGGGC CCATGGGTTT GGGGGCTGAC AGTCTGCGGG CCGGGGTGTC GGGCCTGGGC AACCACAGCA GAGTGCCGTT CCAGAAGGTC GGCAAGCAGC GGCTGCCCGA CATGTACATG CCGTTCCAGG TGCAGCTGAA CCCGGCGCTT GACGCGGCCC GGGAGCACAA TGTGGAGTGG TCGCGCGAGA TGGGTTTCCT GTCGCCGATC CCCGGGGTTC CGGGTCCGGG TGTGTGGAAC GAGCGCCAGA TCCGGGTCTT CGACCTGGCG CTGTGCGCGG CGGGCATCGA CCCCGACGGC ACCCCCGAGG AACTCGAACT GTCGGCGGAC TGGCTGGCCT GGGGCACCTA CGGGGATGAC CTGTACCCCA CGGTCTACGG CCGTGCCAAG GACCTGGCGG GCGCGTACGC GCAGAACCAG CGGCTGGTGC GGTTCATGCC CGTCGAGGGT GAGGAGGCGC CGCAGGCGGT CAACGCGCTG GAGCGGGGCC TGGCGGATCT GTGGCGGCGG ACGGTGCAGC CGCTGGACGA CGCGGGGCGG CGCGAGTTCC GGGCCGCCGT GACGGTGATG CTGGACAGCT GGCTGTGGGA ACTGCACCAC CAGATCCAGA ACCGGATCCC CGACCCGATC GACTACATCG AGATGCGCCG CGAGACCTTC GGCGCCGACA TGACGATGAG CCTGGCCCGG TTGCGCAACG GACGGCAGGT GCCGCGCGCG GTCTACGACT CCCGGCCGAT CCGGGAGCTG GAGAACTCGG CCGTCGACTA CGCGTGCCTG CTCAACGACC TGTTCTCCTA CCAGAAGGAG ATCGAGTTCG AGGGCGAGGT CATCAACGGT GTCCTTGTGG TGCAGGAGTT CCTGGGCTGC TCGGTGCCCG AGGCCATGGC GATCGTCAAC GACCTGATGA CCGCCCGGAT GCGGCAGTTC CAGAACATCG AGGCCAACGA GCTGCCGATC GTGTTCGAGG AGTTCGGTCT GGCGGAAGAG GCCCGCGCCG CCGTCGGCAA ATACGTGGAC GAACTCAAGG ACTGGATGGC CGCGATCCTC AACTGGCACC GGGGCATCAC CCGCTACGAG GAGTCCGAGC TGCGCCGTCC CACCACGGCG CTGGGCGGGC CGATGGGGTT GGGCACCAAC GGGAACCGGC CGCCGCGTCC GCACGTCCCG GTGGTGGCCC CGAATCCGGG CGCCGACCGG CCGTCGTCGG CGGTGGCCGC CATGAACACG CCGGTGAACC ACCCGAAACC CGCGATCGCG ACCATCGGCG TGGGGGCCGT GAAGCACTGA
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Protein sequence | MTSEQPFTLP NFYMPYPARL NPNLAGARGH TMAWAKDMGM LDSPSAGGGL IWDEAELARH DYGLLCAYTH PDCDQAMLDL ITDWYVWVFF FDDHFLEQFK RTRDTVGAKE YLDRLHLFMP VSGQELPEPT NPVEKGLADL WQRTAPHRSE DWKQRFSVST RNLLMESLWE LSNITTGRVA NPIEYVEMRR KVGGAPWSAN LIEHAVNAEV PARLAPTRPL RVLRDTFSDA VHLRNDLFSY QREVQDEGEN ANAVLVFEKF LGRSTQESAD LVNELLTSRL HQFESTALTE MPLLVAAKGV TPDQQAAVAA YVKGLQDWQS GGHEWHMRSS RYMNESARAV PLGPMGLGAD SLRAGVSGLG NHSRVPFQKV GKQRLPDMYM PFQVQLNPAL DAAREHNVEW SREMGFLSPI PGVPGPGVWN ERQIRVFDLA LCAAGIDPDG TPEELELSAD WLAWGTYGDD LYPTVYGRAK DLAGAYAQNQ RLVRFMPVEG EEAPQAVNAL ERGLADLWRR TVQPLDDAGR REFRAAVTVM LDSWLWELHH QIQNRIPDPI DYIEMRRETF GADMTMSLAR LRNGRQVPRA VYDSRPIREL ENSAVDYACL LNDLFSYQKE IEFEGEVING VLVVQEFLGC SVPEAMAIVN DLMTARMRQF QNIEANELPI VFEEFGLAEE ARAAVGKYVD ELKDWMAAIL NWHRGITRYE ESELRRPTTA LGGPMGLGTN GNRPPRPHVP VVAPNPGADR PSSAVAAMNT PVNHPKPAIA TIGVGAVKH
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