Gene Snas_1127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1127 
Symbol 
ID8882313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1200588 
End bp1202897 
Gene Length2310 bp 
Protein Length769 aa 
Translation table11 
GC content68% 
IMG OID 
ProductTerpene synthase metal-binding domain-containing protein 
Protein accessionYP_003509930 
Protein GI291298652 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0393162 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCTG AGCAGCCGTT CACACTGCCC AACTTCTACA TGCCCTACCC GGCACGGTTG 
AACCCGAACC TTGCCGGCGC CCGCGGTCAC ACGATGGCGT GGGCCAAGGA CATGGGGATG
CTCGACTCCC CGTCCGCCGG TGGCGGGTTG ATATGGGACG AGGCCGAACT GGCGCGGCAC
GACTATGGAC TGTTGTGCGC CTACACGCAT CCCGACTGCG ATCAGGCGAT GCTGGATCTG
ATCACCGACT GGTACGTGTG GGTGTTCTTC TTCGACGACC ACTTCCTGGA GCAGTTCAAG
CGCACCCGCG ACACCGTGGG CGCCAAGGAG TACCTGGACC GGCTGCACCT GTTCATGCCC
GTGTCGGGCC AGGAGCTGCC GGAGCCGACC AACCCGGTCG AGAAGGGACT GGCGGACCTG
TGGCAGCGCA CCGCGCCGCA TCGGTCCGAG GACTGGAAGC AGCGGTTCTC CGTCAGCACC
CGCAACCTGC TGATGGAGTC GCTGTGGGAA CTGTCCAATA TCACCACCGG CCGGGTGGCG
AACCCGATCG AGTACGTGGA GATGCGGCGC AAGGTCGGCG GGGCGCCGTG GTCGGCGAAC
CTCATCGAGC ACGCCGTGAA CGCCGAGGTG CCAGCGCGAC TGGCGCCCAC CCGGCCGTTG
CGGGTACTGC GGGACACCTT CTCCGACGCG GTGCACCTGC GCAACGACCT GTTCTCGTAC
CAGCGGGAGG TGCAGGACGA GGGCGAGAAC GCCAACGCCG TCCTGGTGTT CGAGAAGTTC
CTGGGACGGT CCACTCAGGA GTCAGCGGAT CTGGTCAACG AGCTGTTGAC CTCGCGGCTG
CACCAGTTCG AGTCGACGGC GCTGACCGAG ATGCCGCTAC TGGTGGCCGC CAAGGGGGTC
ACACCGGACC AGCAGGCCGC GGTGGCCGCC TACGTGAAGG GCTTGCAGGA CTGGCAGTCG
GGCGGGCACG AGTGGCATAT GCGCTCCAGC CGGTACATGA ACGAGTCGGC CCGCGCGGTG
CCGTTGGGGC CCATGGGTTT GGGGGCTGAC AGTCTGCGGG CCGGGGTGTC GGGCCTGGGC
AACCACAGCA GAGTGCCGTT CCAGAAGGTC GGCAAGCAGC GGCTGCCCGA CATGTACATG
CCGTTCCAGG TGCAGCTGAA CCCGGCGCTT GACGCGGCCC GGGAGCACAA TGTGGAGTGG
TCGCGCGAGA TGGGTTTCCT GTCGCCGATC CCCGGGGTTC CGGGTCCGGG TGTGTGGAAC
GAGCGCCAGA TCCGGGTCTT CGACCTGGCG CTGTGCGCGG CGGGCATCGA CCCCGACGGC
ACCCCCGAGG AACTCGAACT GTCGGCGGAC TGGCTGGCCT GGGGCACCTA CGGGGATGAC
CTGTACCCCA CGGTCTACGG CCGTGCCAAG GACCTGGCGG GCGCGTACGC GCAGAACCAG
CGGCTGGTGC GGTTCATGCC CGTCGAGGGT GAGGAGGCGC CGCAGGCGGT CAACGCGCTG
GAGCGGGGCC TGGCGGATCT GTGGCGGCGG ACGGTGCAGC CGCTGGACGA CGCGGGGCGG
CGCGAGTTCC GGGCCGCCGT GACGGTGATG CTGGACAGCT GGCTGTGGGA ACTGCACCAC
CAGATCCAGA ACCGGATCCC CGACCCGATC GACTACATCG AGATGCGCCG CGAGACCTTC
GGCGCCGACA TGACGATGAG CCTGGCCCGG TTGCGCAACG GACGGCAGGT GCCGCGCGCG
GTCTACGACT CCCGGCCGAT CCGGGAGCTG GAGAACTCGG CCGTCGACTA CGCGTGCCTG
CTCAACGACC TGTTCTCCTA CCAGAAGGAG ATCGAGTTCG AGGGCGAGGT CATCAACGGT
GTCCTTGTGG TGCAGGAGTT CCTGGGCTGC TCGGTGCCCG AGGCCATGGC GATCGTCAAC
GACCTGATGA CCGCCCGGAT GCGGCAGTTC CAGAACATCG AGGCCAACGA GCTGCCGATC
GTGTTCGAGG AGTTCGGTCT GGCGGAAGAG GCCCGCGCCG CCGTCGGCAA ATACGTGGAC
GAACTCAAGG ACTGGATGGC CGCGATCCTC AACTGGCACC GGGGCATCAC CCGCTACGAG
GAGTCCGAGC TGCGCCGTCC CACCACGGCG CTGGGCGGGC CGATGGGGTT GGGCACCAAC
GGGAACCGGC CGCCGCGTCC GCACGTCCCG GTGGTGGCCC CGAATCCGGG CGCCGACCGG
CCGTCGTCGG CGGTGGCCGC CATGAACACG CCGGTGAACC ACCCGAAACC CGCGATCGCG
ACCATCGGCG TGGGGGCCGT GAAGCACTGA
 
Protein sequence
MTSEQPFTLP NFYMPYPARL NPNLAGARGH TMAWAKDMGM LDSPSAGGGL IWDEAELARH 
DYGLLCAYTH PDCDQAMLDL ITDWYVWVFF FDDHFLEQFK RTRDTVGAKE YLDRLHLFMP
VSGQELPEPT NPVEKGLADL WQRTAPHRSE DWKQRFSVST RNLLMESLWE LSNITTGRVA
NPIEYVEMRR KVGGAPWSAN LIEHAVNAEV PARLAPTRPL RVLRDTFSDA VHLRNDLFSY
QREVQDEGEN ANAVLVFEKF LGRSTQESAD LVNELLTSRL HQFESTALTE MPLLVAAKGV
TPDQQAAVAA YVKGLQDWQS GGHEWHMRSS RYMNESARAV PLGPMGLGAD SLRAGVSGLG
NHSRVPFQKV GKQRLPDMYM PFQVQLNPAL DAAREHNVEW SREMGFLSPI PGVPGPGVWN
ERQIRVFDLA LCAAGIDPDG TPEELELSAD WLAWGTYGDD LYPTVYGRAK DLAGAYAQNQ
RLVRFMPVEG EEAPQAVNAL ERGLADLWRR TVQPLDDAGR REFRAAVTVM LDSWLWELHH
QIQNRIPDPI DYIEMRRETF GADMTMSLAR LRNGRQVPRA VYDSRPIREL ENSAVDYACL
LNDLFSYQKE IEFEGEVING VLVVQEFLGC SVPEAMAIVN DLMTARMRQF QNIEANELPI
VFEEFGLAEE ARAAVGKYVD ELKDWMAAIL NWHRGITRYE ESELRRPTTA LGGPMGLGTN
GNRPPRPHVP VVAPNPGADR PSSAVAAMNT PVNHPKPAIA TIGVGAVKH