| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1043 |
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| Symbol | |
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| ID | 8882228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 1103416 |
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| End bp | 1104237 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003509846 |
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| Protein GI | 291298568 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00118636 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.712976 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGCCA AGAAAGCGCA GTGGACGGTG CTGGACCTCG TCGTCATCGC GTTCGCGTTG
ATCCCGGTGG CCTGGCTGAC CAGTCTGTCG CTGAAGGACC CCTCGACGAT CGCCGACGGC
GGTTTCCTCC CCAGTAAGTG GACCTTCGAC AACTACGTCA ACGTCTTCAC CGACGGCGGG
TTCCTGCAAC CGCTGGTCAA CTCGATCGGG ATCGCGTTGA TCTCGACGTT CGTCGCGATC
CTTCTGGGCA CCTTCGCCGC CTACGCCATC GCCCGGCTGG AGTTCCCGGG CCGCAACATC
ATGCTGGGCG CCGCGCTCTT GGTCGCGATG TTCCCGCAGG TGTCGCTGGT GACGCCGCTG
TTCAACATCG AACGCAACCT GGGCCTGTTC AACACCTGGC CGGGGCTGAT CCTGCCGTAC
GTGACCTTCG CGCTGCCGCT GACGATCTAC ACGATGTCGA CGTTCTTCCG GGAGATCCCC
TGGGAACTGG AGAAGGCCGC CAAAATGGAC GGTGCCTCGG GTTTCCAGGC GTTCCGCAAG
GTGATCGTGC CGCTGGCGAC ACCGGGCGTC GTCACCGCCG CGGTGCTGGC TTTCATCCAG
AGCTGGAACG ACTTCCTGTT CGCGATCTCG CTGACCTCCA CCGAACGCGC CCGGACCGCC
CCGGCCGCGA TCTCGTTCTT CACCGGTGCC TCCCAGTTCG AGGACCCCAC CGGTTCGGTC
TCCGCGGCAG CGGTGATCGT CACGATTCCC ATCGTGATCT TCGTTCTGAT TTTCCAACGA
CGCATCGTCA GCGGCCTGAC CGCCGGCGCG GTGAAAGGGT AG
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| Protein sequence | MFAKKAQWTV LDLVVIAFAL IPVAWLTSLS LKDPSTIADG GFLPSKWTFD NYVNVFTDGG
FLQPLVNSIG IALISTFVAI LLGTFAAYAI ARLEFPGRNI MLGAALLVAM FPQVSLVTPL
FNIERNLGLF NTWPGLILPY VTFALPLTIY TMSTFFREIP WELEKAAKMD GASGFQAFRK
VIVPLATPGV VTAAVLAFIQ SWNDFLFAIS LTSTERARTA PAAISFFTGA SQFEDPTGSV
SAAAVIVTIP IVIFVLIFQR RIVSGLTAGA VKG
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