Gene Snas_0904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0904 
Symbol 
ID8882088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp957869 
End bp958738 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content69% 
IMG OID 
ProductEndonuclease/exonuclease/phosphatase 
Protein accessionYP_003509708 
Protein GI291298430 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.355759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.240953 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAACC GCAGACTCAC GTGGTCGCGG CGCTCGCTGC TGAACGGCGC CGTCGGTGCG 
GCGGTGGTGC TGGGTCTCAC CGGCAGTACC GGCCCGGCGG AGCCGTTCCC GCGCTCGGCC
GCCGATCGCC GGACCGGGAA CGACAAGTGG CTGCGAGCCG CGTCGTTCAA CATCCACCAT
GGAGCAAGCC CGGACGACGT GCTCGACCTG GAACGGATCG CCCGCCGTAT CGAGGCACTG
AACGTCGATG TCATCGGATT GCAGGAGGTG GACCGGTTCT GGAAACGCAG CGACCATGTT
GACCAACCGG CGTGGCTGTC GAGACGGCTC GGCCTGCACG TCGCGTTCGG GCTCAACGAG
TTGCGGCGAT CCGACGGCGC GGGCCGACGC CGCGAGTACG GCACCGCGAT CCTGTCGCGC
TGGCCGATCC GCGAGACCCG CAACGTCGCG CTGCCGCGCT GGGACGATCA CGCGCGGCAC
GGGCTGCTGC GCACCGAGAT CGACATGCCG GGCGGGTCGC TGTCCTTCGC CACCACGCAT
CTCATCCACG CGCACCATGA CGAGGAACGC GCGGCGCAGG CCAAGGCGGT CGCGAAACAG
TTCGCCGACG ACGCCCGCCG CAGCGTCGTC GTGGGCGACT TCAACGACGA GCCGAACACG
CCCGCGATCG CGGCGATGAC GCGGCGGTTC ACCGACGCGT GGGCGGTGGC CGGTTCCGGG
AAGGGATACA GCTACTCGTC CACGAAACCC AAGCGCCGCA TCGATTACGT GTTCGGCTCC
GAAGACCTGG AGCCGCGTGC GATGACCGTC GACGACACCG ACCCGCGGGC TTCGGATCAC
CTGCCGATCC TGACCGAGTT CGAACTGTGA
 
Protein sequence
MSNRRLTWSR RSLLNGAVGA AVVLGLTGST GPAEPFPRSA ADRRTGNDKW LRAASFNIHH 
GASPDDVLDL ERIARRIEAL NVDVIGLQEV DRFWKRSDHV DQPAWLSRRL GLHVAFGLNE
LRRSDGAGRR REYGTAILSR WPIRETRNVA LPRWDDHARH GLLRTEIDMP GGSLSFATTH
LIHAHHDEER AAQAKAVAKQ FADDARRSVV VGDFNDEPNT PAIAAMTRRF TDAWAVAGSG
KGYSYSSTKP KRRIDYVFGS EDLEPRAMTV DDTDPRASDH LPILTEFEL