Gene Snas_0880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0880 
Symbol 
ID8882064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp929168 
End bp930373 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content71% 
IMG OID 
ProductNa+/H+ antiporter NhaA 
Protein accessionYP_003509684 
Protein GI291298406 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.324088 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGTA AGCTGGTGCG CAAGGTCGCC GCGGTGCCCG CCGAGGTGGT CCGGTACCTA 
CGGGTCGAGG CCACCGGCGG TCTGATCCTG CTGGTCGCCA CCGCCGCCGC GCTCATCCTG
GCCAACCTGT CGGTCACCGC TGAGGGGTAC CGGCGGCTCA CCGAGACCAC CGTCGGACCC
GAGGCGCTGC ACCTCAACCT GACGCTGGGC GCCTGGGCCA ACGACGGGCT GCTGGCGATC
TTCTTCCTGG TCGCGGGACT GGAACTCAAA CGCGAACTCG TGTCGGGGGA GCTGTCCAGC
CCGCGCAAGG CGATGCTGCC GCTGTTCGCC GCCGTCGGCG GCATGGCGGT CCCGGCGCTG
GTGGCCTTCG GCGTCGCCTT TGACGCCCCC GGCGGCGGCG AGGTGTGGCC GGTGCCCACC
GCCACCGACA TCGCGTTCGC GCTGGCGGTG CTGGCGGTCG TCGCCTCCAA CCTGCCGTCC
GGGGTGCGGG TGTTCCTGCT GTCGCTGGCG GTCGTGGACG ACCTGGGCGC CATCACGCTG
ATCGCGGTGC TGTACACCGA CGGCATCAAA CTCGTGCCGC TGGCGGTCAG TCTCGCCTGC
GTGGCCGCGT ACTGGCTGCT GCAATCGCGC GGCATCAGGT TCCTGCCGCT GTACATCGTG
CTGGGCTTCA TCGCCTGGAT GACGATGCAC GAGGCCGGGG TGCACGCCAC CATCGCCGGG
GTGCTGCTGG CCTTCGCCAC CCGGGTGAAA CCGCGCGCGG GCGAGAAACA CGCCCCGGCG
CTGCGGCTGG AGCACGCCCT GCAACCGCTG TCGGCGGGCG TGTGCGTGCC CGTGTTCGCG
TTCTTCGCCG CCGGGATCTC GCTGGAGGAG GACGCGATGG GCGCGTTCCT GGCCGACCGG
GCCGCGCTGG CGGTGGTCGC CGGACTCGTC ATCGGGAAGT TCATCGGCGT GTACGGCGGT
TCCCGGCTGG CGGTGTGGCT GGGCGCGGCC CGGCTGCCGT CCGGCCTGCT GTGGCGCGAC
ATCGCCGCGG TGGCGTTCCT GACCGGCTGC GGTTTCACCG TCAGCCTGCT GATGGCCGAA
CTGGCGTTCA GCGACCCGGC CCAGCAGGCC AACGTCAAGG CCGCGGTGCT GATCGGTTCG
CTGCTGGCGG CGCTGATCGC CGCGACAGTA CTGCGTATCC GGGTCAAACG ACGCGCCGAA
ACGTGA
 
Protein sequence
MARKLVRKVA AVPAEVVRYL RVEATGGLIL LVATAAALIL ANLSVTAEGY RRLTETTVGP 
EALHLNLTLG AWANDGLLAI FFLVAGLELK RELVSGELSS PRKAMLPLFA AVGGMAVPAL
VAFGVAFDAP GGGEVWPVPT ATDIAFALAV LAVVASNLPS GVRVFLLSLA VVDDLGAITL
IAVLYTDGIK LVPLAVSLAC VAAYWLLQSR GIRFLPLYIV LGFIAWMTMH EAGVHATIAG
VLLAFATRVK PRAGEKHAPA LRLEHALQPL SAGVCVPVFA FFAAGISLEE DAMGAFLADR
AALAVVAGLV IGKFIGVYGG SRLAVWLGAA RLPSGLLWRD IAAVAFLTGC GFTVSLLMAE
LAFSDPAQQA NVKAAVLIGS LLAALIAATV LRIRVKRRAE T