Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_0858 |
Symbol | |
ID | 8882042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 908496 |
End bp | 909854 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | virulence factor Mce family protein |
Protein accession | YP_003509662 |
Protein GI | 291298384 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAGC GAATCGCCGG TCTCGGCTTT CTTCTCGTCC TCGCGGCGCT GCTGGGTCTG TGCGTGGCGT CCTATATGAA ACTGTTCAGC CCCAAGGTGG ACGTGACCGT GCAGGCCGCC ACGGCGGGAC TGCAGATGTC CCGGGGCGCC GACGTGAAGC TGCACGGCGT GCTGGTCGGC GAGGTCCGCG ACATCAACTC CACAGGCGAC GGCGCCGAGC TGGATGTGGC GCTGGACCCC GATTCCACCG CCTCGATCCC GGCCGGGGTC ACCGCCCGGC TGCTGCCCAA GACGCTGTTC GGCGAGAAGT ACGTCGAACT GATCGCCCCC AAGTCCGACA CCGGTGGTTC GATCCAGCCC AACACCGTCG TCAAGGAGGA CAAGTCCAAG GAGGCCGTCG AACTGAACGA CGTCCTGGAC GGGGCGCTGC CGCTGCTGCG GGCCGTCCCG CCGGAGAAGC TGTCGGTGAC GCTGTCGGCC ATCGCCGGCG CGCTCGACGG CCGTGGTGAC GAACTGGGCG ACACGATCGT GAAGCTCGGC GACATCGTCC GCACCCTGAA CAAGGAGATG CCGACCATCG AGGCCGACAT CGACGAGCTG GCCAAGGTGC TGGACAACTA CCGGGGCGCG CTGCCCGACC TGACGAAGGT CCTGGAGAAC CTGACGGTCA CCAACAAGAC CATCACCGAC CAGGAGGACG AGCTGCAGGC GATGTGGATG TCGACGCAGG ACTTCAGCGA CGACACCCGG GTGTTCCTGG ACCGCTACCA GGGACGGCTG ATCCAGTTCG GCGAGGTCAC GCAGCCGTTC ATCGAGCTGC TGGCGACCTA CTCGCCGGAG TATCCGTGCC TGTTCCAGGG CCTGACCGAG CTTCAGCCCG ACATCGAGGA GGCCTTCTCG GGCGGGCGGC TGCACATCAC GCTGGAGATC ACCCAGAACA ACGGCAAGTA CGAGTCCGGC CGCGACGAAC CCGAGTGGAC CAGCCAGTAC GGGCCCAACT GCCGGGGCCT GCCGGAGGGC AACTCGGAGG CCGCCGAGAA CCAGTTCGGC AACGGCTACG ACTACGACGG TGAGCGCAGC AACCTGCCGA TCGAGATCCC GGGGCTGACC GACGCCCCGG CGCAGGAAGA CGACGAGGGC ACCAACGCCG AGAACAAGGA CGATGAGGAC GAGGACGGTC CCGGCGTCGA GCTGCCGTTC GATCCGATGA TGGGCTACGC CGGTACCGAG GAGGAACAGT CGGTGTTCAC GCCGATGGTG GCCGCCTCGA CCGGTTCCGA CGTCACCGAC CTCAACGGCG ACCTGGTCTC GTTGCTGTAC GGACCGATCT TCCGGGGTGC CACAATTTCT GCCCGTTAG
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Protein sequence | MKQRIAGLGF LLVLAALLGL CVASYMKLFS PKVDVTVQAA TAGLQMSRGA DVKLHGVLVG EVRDINSTGD GAELDVALDP DSTASIPAGV TARLLPKTLF GEKYVELIAP KSDTGGSIQP NTVVKEDKSK EAVELNDVLD GALPLLRAVP PEKLSVTLSA IAGALDGRGD ELGDTIVKLG DIVRTLNKEM PTIEADIDEL AKVLDNYRGA LPDLTKVLEN LTVTNKTITD QEDELQAMWM STQDFSDDTR VFLDRYQGRL IQFGEVTQPF IELLATYSPE YPCLFQGLTE LQPDIEEAFS GGRLHITLEI TQNNGKYESG RDEPEWTSQY GPNCRGLPEG NSEAAENQFG NGYDYDGERS NLPIEIPGLT DAPAQEDDEG TNAENKDDED EDGPGVELPF DPMMGYAGTE EEQSVFTPMV AASTGSDVTD LNGDLVSLLY GPIFRGATIS AR
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