| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0815 |
|---|
| Symbol | |
|---|
| ID | 8881999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 863512 |
|---|
| End bp | 864135 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003509620 |
|---|
| Protein GI | 291298342 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAGCCA AGTCCGGTCG GTTCCAGCCC AGGAAGAACC CGTCGCAGCA CCGCGCCCGG
CTCACCCGGG ACCGGATCCT GGCCGCGGCG GCTCAGGTTT TCGCCAGCCA CGGTTACGCC
GCCGGGACCA CCGACCGCAT CGCCGCCGCG GCGAGGATCT CCATCGGTTC GCTGTACCAG
TACTTTCCGA ACAAGGACGC GGTGTTGCTG GCGCTCAGTC AGGCCCACCT GGAGGCGGCC
ACCGACGCGA TCCGGGCGGT GCTGGCCGAG GCGGGCGAGG ACTGGCTGGA CGGCGTGATC
GCCGCCGTCA TCGACGGGCA CGCCGCCAAC CCGAGGCTCC ACAAGGTCCT GTTCGACGAG
GCACCCCGCA CTCCAGAGCT GCTGGACCGG TTGCGGGCGG CGGAATCCGC GATCGCCGCG
ACCATCGCCG AGCGGCTGCG CGGCGACGGG CGATTCGACG TCGAGGATCC GGACGAGGCC
GCCGACCTCG TGGTGGCCAC AGTGGAGTCG CTGACCCATC ACTTCGTGGC CCGCGACCCC
GACGGCTTCG ACGCCGCGAC AACCCAGCAG CGCATCAGCG AGCTGCTGAC CCGCCACCTG
CGGCCAGCCC CGCCGCCAAG CTGA
|
|---|
| Protein sequence | MGAKSGRFQP RKNPSQHRAR LTRDRILAAA AQVFASHGYA AGTTDRIAAA ARISIGSLYQ
YFPNKDAVLL ALSQAHLEAA TDAIRAVLAE AGEDWLDGVI AAVIDGHAAN PRLHKVLFDE
APRTPELLDR LRAAESAIAA TIAERLRGDG RFDVEDPDEA ADLVVATVES LTHHFVARDP
DGFDAATTQQ RISELLTRHL RPAPPPS
|
|---|
| |