Gene Snas_0690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0690 
Symbol 
ID8881874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp732978 
End bp734441 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509496 
Protein GI291298218 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.335063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCA GACGAGATCA GTTGCAGAGC TATCAGTTCC TCTTGCAACG GATCGTCTCG 
GCACTCGTCT ACCGCAAGAC CGACCCGGCC GAGTCGCCGT TTCGCCGGGC GGGTGGCGCC
ATCTTCGCCG GGGTCATGCT GAGCATCCTC GCCCTCGCGG TCACCGCGGT CATCGGCCTG
TTCGCCACCG GCTGCGGCCG CACCGCGAAC TGGAAGGACG GCGCGGCGAT CATCAAGGAG
GAGGAGACCG GGGCCTTCTA CGTCATCCTC CCCCGCAAGG ACGAGAAGAA GGCCGACCAG
AAGCAGGTCC TCTACGAGAC CGCGAACTTC GCCTCCGCCG CCCTCATCGC GGGCACGACC
GAGGTCTTCG AGATCAAGGC CCAGTCACTG CGCTCCGACG ACGACAGTGT GTCCATGGGG
CCGCGCGTCG GGATCCCGGG AGCGCCGAAC TCCATCCCCA AGGCCGACGC GCTGTCCGGA
GACGACTGGA CGCTGTGCTC CTTCCCCGCC GACAAGAACA ACGACACCCC CACGTCGAAG
CTCTATATCG GAACGGCGAA GACCAAGGGC GATGCGCTGG GCAAGGACGC CCTGCTCGCC
AAGGCCGGTG AGGAGCAGTA CCTCGTATCG CAGGGTCACA AGTACCCCAT CAGCGACGAC
GCCATCGGCT ACCTGAACGC GACCGGGGAG ACCGTGCACG AGGCCGACAA GGCCGTCCTG
GACGGCGTCG AATCGGGCGA GCCCCTGGAG GCACCCGACT ACGGCGACCC CAAGGACGAG
TCGACCACCG GCGATCCAGT GGGGACCGTC TACAAGAACA CCGGCGGCGG CAACACCACC
TTCTGGGTTG CCACAAAGGA CAACATCGCC TCGATCACCG AACTGCAGGC GTACCTCATC
ACCGAGGGCA GCGAGGACAA GTTCAAAGAG GCCAACACGA GTGAGTTCTC CGACGACCCG
GACGACCTCA AGCCCGCCGA GGAGAGCTCG CCGCTGGAGA AGCTCCCCGA ATTCGCCGAC
GCCGCCGACG AGTCCCGCCT GTGCGCGGTG TTCCCGTCCG AGGGCAAGGA GACGAAGATC
GTCTACAACG CCGACACCCC CGACATCGAC GGCGTGGGAA CACCCGAGGT CAAGGAGGGT
GGCGCCGCGC TGGCGGACCA GATCGTCGTG GCCCCAGGCA CCGGCGCCCT GGTCGAGACG
GGTGACTCCG AGGACGAGGG CGGACTGTCC CTGGTCACCG CCTCCGGGGA GATCTTCGGC
ATCGAGCAGA CGGATCACAG CGGGTCCAAG AACGGCGCGG CCGCCCCGGC CGACGCGCTC
ACCGCCTTCG GATACCGAGG CGACAACAGC AAGGGGATCA AGGCTCCGGC TCGGGTTCAC
ATGCCCAGCC AGGTACTCAG TCTGATTCCG CGGGGCCCCG ATCTGAGTCC TGACAGTGCG
ATGGAAACCG TGGGGAGCCG GTGA
 
Protein sequence
MATRRDQLQS YQFLLQRIVS ALVYRKTDPA ESPFRRAGGA IFAGVMLSIL ALAVTAVIGL 
FATGCGRTAN WKDGAAIIKE EETGAFYVIL PRKDEKKADQ KQVLYETANF ASAALIAGTT
EVFEIKAQSL RSDDDSVSMG PRVGIPGAPN SIPKADALSG DDWTLCSFPA DKNNDTPTSK
LYIGTAKTKG DALGKDALLA KAGEEQYLVS QGHKYPISDD AIGYLNATGE TVHEADKAVL
DGVESGEPLE APDYGDPKDE STTGDPVGTV YKNTGGGNTT FWVATKDNIA SITELQAYLI
TEGSEDKFKE ANTSEFSDDP DDLKPAEESS PLEKLPEFAD AADESRLCAV FPSEGKETKI
VYNADTPDID GVGTPEVKEG GAALADQIVV APGTGALVET GDSEDEGGLS LVTASGEIFG
IEQTDHSGSK NGAAAPADAL TAFGYRGDNS KGIKAPARVH MPSQVLSLIP RGPDLSPDSA
METVGSR