Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_0690 |
Symbol | |
ID | 8881874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 732978 |
End bp | 734441 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003509496 |
Protein GI | 291298218 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.335063 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCACCA GACGAGATCA GTTGCAGAGC TATCAGTTCC TCTTGCAACG GATCGTCTCG GCACTCGTCT ACCGCAAGAC CGACCCGGCC GAGTCGCCGT TTCGCCGGGC GGGTGGCGCC ATCTTCGCCG GGGTCATGCT GAGCATCCTC GCCCTCGCGG TCACCGCGGT CATCGGCCTG TTCGCCACCG GCTGCGGCCG CACCGCGAAC TGGAAGGACG GCGCGGCGAT CATCAAGGAG GAGGAGACCG GGGCCTTCTA CGTCATCCTC CCCCGCAAGG ACGAGAAGAA GGCCGACCAG AAGCAGGTCC TCTACGAGAC CGCGAACTTC GCCTCCGCCG CCCTCATCGC GGGCACGACC GAGGTCTTCG AGATCAAGGC CCAGTCACTG CGCTCCGACG ACGACAGTGT GTCCATGGGG CCGCGCGTCG GGATCCCGGG AGCGCCGAAC TCCATCCCCA AGGCCGACGC GCTGTCCGGA GACGACTGGA CGCTGTGCTC CTTCCCCGCC GACAAGAACA ACGACACCCC CACGTCGAAG CTCTATATCG GAACGGCGAA GACCAAGGGC GATGCGCTGG GCAAGGACGC CCTGCTCGCC AAGGCCGGTG AGGAGCAGTA CCTCGTATCG CAGGGTCACA AGTACCCCAT CAGCGACGAC GCCATCGGCT ACCTGAACGC GACCGGGGAG ACCGTGCACG AGGCCGACAA GGCCGTCCTG GACGGCGTCG AATCGGGCGA GCCCCTGGAG GCACCCGACT ACGGCGACCC CAAGGACGAG TCGACCACCG GCGATCCAGT GGGGACCGTC TACAAGAACA CCGGCGGCGG CAACACCACC TTCTGGGTTG CCACAAAGGA CAACATCGCC TCGATCACCG AACTGCAGGC GTACCTCATC ACCGAGGGCA GCGAGGACAA GTTCAAAGAG GCCAACACGA GTGAGTTCTC CGACGACCCG GACGACCTCA AGCCCGCCGA GGAGAGCTCG CCGCTGGAGA AGCTCCCCGA ATTCGCCGAC GCCGCCGACG AGTCCCGCCT GTGCGCGGTG TTCCCGTCCG AGGGCAAGGA GACGAAGATC GTCTACAACG CCGACACCCC CGACATCGAC GGCGTGGGAA CACCCGAGGT CAAGGAGGGT GGCGCCGCGC TGGCGGACCA GATCGTCGTG GCCCCAGGCA CCGGCGCCCT GGTCGAGACG GGTGACTCCG AGGACGAGGG CGGACTGTCC CTGGTCACCG CCTCCGGGGA GATCTTCGGC ATCGAGCAGA CGGATCACAG CGGGTCCAAG AACGGCGCGG CCGCCCCGGC CGACGCGCTC ACCGCCTTCG GATACCGAGG CGACAACAGC AAGGGGATCA AGGCTCCGGC TCGGGTTCAC ATGCCCAGCC AGGTACTCAG TCTGATTCCG CGGGGCCCCG ATCTGAGTCC TGACAGTGCG ATGGAAACCG TGGGGAGCCG GTGA
|
Protein sequence | MATRRDQLQS YQFLLQRIVS ALVYRKTDPA ESPFRRAGGA IFAGVMLSIL ALAVTAVIGL FATGCGRTAN WKDGAAIIKE EETGAFYVIL PRKDEKKADQ KQVLYETANF ASAALIAGTT EVFEIKAQSL RSDDDSVSMG PRVGIPGAPN SIPKADALSG DDWTLCSFPA DKNNDTPTSK LYIGTAKTKG DALGKDALLA KAGEEQYLVS QGHKYPISDD AIGYLNATGE TVHEADKAVL DGVESGEPLE APDYGDPKDE STTGDPVGTV YKNTGGGNTT FWVATKDNIA SITELQAYLI TEGSEDKFKE ANTSEFSDDP DDLKPAEESS PLEKLPEFAD AADESRLCAV FPSEGKETKI VYNADTPDID GVGTPEVKEG GAALADQIVV APGTGALVET GDSEDEGGLS LVTASGEIFG IEQTDHSGSK NGAAAPADAL TAFGYRGDNS KGIKAPARVH MPSQVLSLIP RGPDLSPDSA METVGSR
|
| |