Gene Snas_0616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0616 
Symbol 
ID8881800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp651720 
End bp653030 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content71% 
IMG OID 
ProductYibE/F family protein 
Protein accessionYP_003509423 
Protein GI291298145 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAACCG TCCACTCACA CCAGACCGAC GAGAAGAACA CGCCGACCAC GGTGCGGTTC 
GCGCTGTACC TGCTCGTGCC GGTGGCGGTG GCCACCGCGA TCGCCATGGC CCTGATGTGG
CCGACCGACA AACCCGAGGC GACGTCGGCC GCCGGTGCCC AGGAGGTCAC CGGCACCGTC
ACCGGGATCT CGCTGAAGGA GTGCCCCGAC ACCGGGACCG AGCCCGGGGG CGAACCCGGC
GACAGCGGGG CGTCGGCCAA GCCCGAACGC TGCGGCACCG TCACCGTGGA GCTGACCAGC
GGCGCCGATG AGGGCGACAT CGTCACCTCG ACCCTGCCCA ACGGACCCGG CGCGCCCTAC
GTCGAGGTCG GCGACTCGGT CATCCTGATG CACCTGCCCG AGGCCGAGTT CTCGTACTCG
ATCATCGACC AGGACCGATC AACGCCACTG TGGATACTGG CGATCGCGTT CGCGCTGGCC
GTCATCGCCT TCGGACGGCT GCGGGGGCTG CTGAGCCTCG TCGGGCTCGC CGTGACCTTC
GCGGTGCTGC TGCTGTTCAT CGTGCCCGCG ATCCTGTCGG GCGAGTCGCC GCTGCCGGTG
GCGATCGTCG GGTCCTGCGC GATCATGCTG GCTGTCCTGT ACCTGACGCA CGGGTTCCGC
GCCACCACGA CCATCGCCGT GGCCGGGACG CTGTGCAGCC TGGTCCTGAC CGGGCTGCTG
TCGGCGCTGG CCGTGGGCAT GGCGCACCTG ACCGGCATCT CCGACGAGGA CACCAGCGTC
CTGTCGATGT ACCACGGCGT CAACACCGAG GGGCTGCTGT TGGCGGGCAT CCTCATCGGC
TCGCTGGGGG CGCTGGACGA CGTCACGGTG ACCCAGGCCA GCGCGGTGTC CGAGCTGGCG
CGCGCCAACC CCGAGTACGG GTTCGGGGAG CTGTACTCGG CGGCGGCCCG GATCGGGCGC
TCGCACATCG CCTCGGTGGT CAACACGATC ATCCTCGCCT ACGCGGGGGC GGCGCTGCCG
CTGCTGATCC TGATCGCCGC CGCTGACCGG CCGTTGAGCG AAACGCTGAC CACGCAGCTC
ATCGCCGAGG AGATCGTGCG CGGCATCGTC GGCACCATCG GACTGATCGC GGCCGTCCCG
CTGACGACGC TGCTGGCGGC GCTGACCGTC CACAAGTTCG CTCCCCCGCC CGGGGTGGAG
CTGGCGACGC CGGGGCCGCG CCCGAAACGG CCCCGCAACG AGTGGCTGGA CATGCACGAG
GACGAGACCC CGCCGCCGGA GAGCCGTCCC GAGGCCGAGG AGCCGCGATA G
 
Protein sequence
MGTVHSHQTD EKNTPTTVRF ALYLLVPVAV ATAIAMALMW PTDKPEATSA AGAQEVTGTV 
TGISLKECPD TGTEPGGEPG DSGASAKPER CGTVTVELTS GADEGDIVTS TLPNGPGAPY
VEVGDSVILM HLPEAEFSYS IIDQDRSTPL WILAIAFALA VIAFGRLRGL LSLVGLAVTF
AVLLLFIVPA ILSGESPLPV AIVGSCAIML AVLYLTHGFR ATTTIAVAGT LCSLVLTGLL
SALAVGMAHL TGISDEDTSV LSMYHGVNTE GLLLAGILIG SLGALDDVTV TQASAVSELA
RANPEYGFGE LYSAAARIGR SHIASVVNTI ILAYAGAALP LLILIAAADR PLSETLTTQL
IAEEIVRGIV GTIGLIAAVP LTTLLAALTV HKFAPPPGVE LATPGPRPKR PRNEWLDMHE
DETPPPESRP EAEEPR