| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0560 |
|---|
| Symbol | |
|---|
| ID | 8881743 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 593658 |
|---|
| End bp | 594830 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_003509367 |
|---|
| Protein GI | 291298089 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.747431 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCCA AGGAGATCGT GGGCAACAAG AAGACCAGCC GCGCCGGAAT CATCGGCGCG
GTAGCCGGTT TGGCCGCGGC GGGGATAGCA GCCGGGGTGG CCACCGAGCG TTACCTGATC
AAACGGGCCC GCAGCGACCC GAATGATCCC TATGCCGAGG AGCCGTTCGC GAACTTGCAC
GCCGACGACA TTCGCACCAT CACCACCGCG GACGGCATCG ACGTCCACGT CGAGACCGTG
GACAGCCGCG GCGTCGGCGA GGCCGAGGCC ACCGCGGTGT TCGTCCACGG TTTCTGCCTG
GACATGGGAA CCTTCCACTT CCAACGCCGC GCCCTCACCG AGTCCACAAT GCCACTGCGG
GCCGTCTACT ATGACCAACC CGGCCACGGC CAGTCCGGCG AACTGCCGCT GCCGGAGTAC
GACATCGAAT CGTTGGCCGA AGCCCTGTAC GCGGTGCTCG CCAAAGCGGT ACCGACCGGC
CCGGTGTTCC TGGTCGGACA TTCCATGGGC GGCATGACGA TCCTGGCGTT CGCGCGCCGC
TACCCGGAAC TGTTCGCCTC CCGGGTGCGG GGCGTCGCAC TGCTGTCCAC AACGGCCGGA
GGACTGGACA AGGTGTCCTT CGGTGCCCCC AAGGCGCTGG CCCGGGCCCG CAAGGTCTTC
CTGCCCGCGC TGTCGAAGGC GATCGCACTG ACCCCCGGCG TCATCGACGG CGCCCGCAGG
GTAGCCAGCG ACCTGGCCTG GCGACTGACC CGCCGCTACG GCTTCGCGAC CCGCAAACCC
TCACCGTCCC TGGTGTCCTA TGTCGAGAAG ATGAACACCG CCACCCCCAT CAAGACCGTC
ATCGGCTTCA GCAAAGCACT CCTGGAACAC GACGAACACG ACGTGCTGCC GCAACTCGCC
TCGATCCCGG TGTTCATCAG CTGCGGCGAC TCCGACCAGT TCACCCCGCC GGAACACTCG
GTCGCGCTGG CCGAAGCGCT GCCACACGCG AAACTCAACA TCGTCCCGGA AGCCGGACAC
GTCGCGCTGC TGGAGAAGCC CGAACTGGTC ACCGACCCGC TGTTCGCCCA CCTGAGCGAG
TGCCTGGACG CCCTGGAACG CGACCGCCAA CCAGCAGAAC CTGTCAAACG CCGCAAACCC
TGGCTGCGCA AGAAGAAGAG AACGGGGGAC TAA
|
|---|
| Protein sequence | MSPKEIVGNK KTSRAGIIGA VAGLAAAGIA AGVATERYLI KRARSDPNDP YAEEPFANLH
ADDIRTITTA DGIDVHVETV DSRGVGEAEA TAVFVHGFCL DMGTFHFQRR ALTESTMPLR
AVYYDQPGHG QSGELPLPEY DIESLAEALY AVLAKAVPTG PVFLVGHSMG GMTILAFARR
YPELFASRVR GVALLSTTAG GLDKVSFGAP KALARARKVF LPALSKAIAL TPGVIDGARR
VASDLAWRLT RRYGFATRKP SPSLVSYVEK MNTATPIKTV IGFSKALLEH DEHDVLPQLA
SIPVFISCGD SDQFTPPEHS VALAEALPHA KLNIVPEAGH VALLEKPELV TDPLFAHLSE
CLDALERDRQ PAEPVKRRKP WLRKKKRTGD
|
|---|
| |